RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 THAP12O43422 761 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 TNFSF9P41273 254 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 ITIH3Q06033 890 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 MKRN3Q13064 507 aaKnown RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 SRRM1Q8IYB3 904 aaKnown RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 RAB17Q9H0T7 212 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 HACL1Q9UJ83 578 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 CLTAP09496 248 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 CCDC172P0C7W6 258 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 MFAP3P55082 362 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 PRKCEQ02156 737 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 KRT39Q6A163 491 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 SEC16BQ96JE7 1060 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 INTS9Q9NV88 658 aaKnown RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 PIK3CDO00329 1044 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 DNM1LO00429 736 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 RGL2O15211 777 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 MEFVO15553 781 aaPredicted RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 ZBED4O75132 1171 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 CD19P15391 556 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 SP2Q02086 613 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 ZDHHC24Q6UX98 284 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 ANKS1BQ7Z6G8 1248 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 TBC1D1Q86TI0 1168 aaPredicted RBP16.07■□□□□ 0.16
VARS2-211ENST00000541562 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 TMEM161BQ8NDZ6 487 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 FBXL13Q8NEE6 735 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 OR5B17Q8NGF7 314 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
VARS2-211ENST00000541562 PFASO15067 1338 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 CCDC188H7C350 402 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 GOLGA8RI6L899 631 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 RPSAP08865 295 aaKnown RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 CDC25CP30307 473 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 PTENP60484 403 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 RUFY4Q6ZNE9 571 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 TJP2Q9UDY2 1190 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 BAIAP2L1Q9UHR4 511 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 PSMC5P62195 406 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 ANKMY2Q8IV38 441 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 ANKRD35Q8N283 1001 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 NETO2Q8NC67 525 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 ZWILCHQ9H900 591 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 COL24A1Q17RW2 1714 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 RASGRF2O14827 1237 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 RTN2O75298 545 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 NT5C2P49902 561 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 TAS2R40P59535 323 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 TFAMQ00059 246 aaKnown RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 GJC2Q5T442 439 aaPredicted RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 TXNRD3NBQ6F5E7 133 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 SLFN11Q7Z7L1 901 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 SLC13A5Q86YT5 568 aaPredicted RBP16.06■□□□□ 0.16
VARS2-211ENST00000541562 TMEM206Q9H813 350 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 PXMP2Q9NR77 195 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 C1orf112Q9NSG2 853 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 PCSK1NQ9UHG2 260 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 TRIM33Q9UPN9 1127 aa16.06■□□□□ 0.16
VARS2-211ENST00000541562 WDR64B1ANS9 1081 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 PGK2P07205 417 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 MOB2Q70IA6 237 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 CEP120Q8N960 986 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 FAM114A2Q9NRY5 505 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 FGFR1OP2Q9NVK5 253 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 COILP38432 576 aaPredicted RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 NSFP46459 744 aaKnown RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 GMPSP49915 693 aaPredicted RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 ZNF131P52739 623 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 ITGA8P53708 1063 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 CACNA2D3Q8IZS8 1091 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 TACO1Q9BSH4 297 aaKnown RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 RASAL2Q9UJF2 1139 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 SETQ01105 290 aaPredicted RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 DUPD1Q68J44 220 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 FAM160B2Q86V87 743 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 CCDC13Q8IYE1 715 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 OSBPL7Q9BZF2 842 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 CDC42EP4Q9H3Q1 356 aaKnown RBP16.05■□□□□ 0.16
VARS2-211ENST00000541562 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
VARS2-211ENST00000541562 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 GRAP2O75791 330 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 ECEL1O95672 775 aa16.04■□□□□ 0.16
VARS2-211ENST00000541562 ZBTB48P10074 688 aaPredicted RBP16.04■□□□□ 0.16
VARS2-211ENST00000541562 MMP14P50281 582 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms