RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 FLT3LGP49771 235 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 CDC42EP1Q00587 391 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 SP140Q13342 867 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 FOXE3Q13461 319 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 IL10RAQ13651 578 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 R3HDM1Q15032 1099 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 ATP2B3Q16720 1220 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 RRP12Q5JTH9 1297 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 IFIT1BQ5T764 474 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 AFMIDQ63HM1 303 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 ZNF572Q7Z3I7 529 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 FAM83AQ86UY5 434 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 XYLT1Q86Y38 959 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 ATXN2LQ8WWM7 1075 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 PGBD4Q96DM1 585 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 CYFIP2Q96F07 1278 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 TMX3Q96JJ7 454 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 LRGUKQ96M69 825 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 PNMA8BQ9ULN7 279 aaPredicted RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 NOB1Q9ULX3 412 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 RUVBL1Q9Y265 456 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 SIK3Q9Y2K2 1263 aa3.86□□□□□ -1.79
KNTC1-212ENST00000541466 CFAP20Q9Y6A4 193 aaKnown RBP3.86□□□□□ -1.79
KNTC1-212ENST00000541466 SGTAO43765 313 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 OFD1O75665 1012 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 HMGB1P09429 215 aaKnown RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 SNRPA1P09661 255 aaKnown RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 ALOX15P16050 662 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 DDCP20711 480 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 FPR1P21462 350 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 EDNRBP24530 442 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CYP2C19P33261 490 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 ALDH1A3P47895 512 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 RAP2BP61225 183 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CREMQ03060 361 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CNGB1Q14028 1251 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 LRRC41Q15345 812 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 NFE2Q16621 373 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 USP39Q53GS9 565 aaKnown RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 DCAF17Q5H9S7 520 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 MFSD14BQ5SR56 506 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 GADL1Q6ZQY3 521 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 DOK3Q7L591 496 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 TPH2Q8IWU9 490 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 DRC7Q8IY82 874 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 GSPT2Q8IYD1 628 aaKnown RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CHPFQ8IZ52 775 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 RNF169Q8NCN4 708 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 MDGA1Q8NFP4 955 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CASKIN2Q8WXE0 1202 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 STON2Q8WXE9 905 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 EDAQ92838 391 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CAMKK2Q96RR4 588 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 GPR87Q9BY21 358 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 SPON1Q9HCB6 807 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 NMRK2Q9NPI5 230 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 C11orf21Q9P2W6 132 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 HECAQ9UBI9 543 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CLCA2Q9UQC9 943 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 ACTL7AQ9Y615 435 aa3.85□□□□□ -1.79
KNTC1-212ENST00000541466 MYBBP1AQ9BQG0 1328 aaKnown RBP3.85□□□□□ -1.79
KNTC1-212ENST00000541466 CXorf49A8MYA2 514 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 RFPL1O75677 317 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 AMY1AP04745 511 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 U2AF1L5P0DN76 240 aaPredicted RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 HSPA6P17066 643 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 ATP5JP18859 108 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 PDCP20941 246 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 AKAP5P24588 427 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 PCSK1P29120 753 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 MAN2A2P49641 1150 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 CLRN1P58418 232 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 U2AF1Q01081 240 aaKnown RBP eCLIP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 ABHD18Q0P651 414 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 TARDBPQ13148 414 aaKnown RBP eCLIP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 MTM1Q13496 603 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 PGS1Q32NB8 556 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 CCDC157Q569K6 752 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 FAM47AQ5JRC9 791 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 ANKS6Q68DC2 871 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 EFCAB12Q6NXP0 572 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 MAMDC4Q6UXC1 1216 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 USP45Q70EL2 814 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 TTC7BQ86TV6 843 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 GRAMD1CQ8IYS0 662 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 ZGPATQ8N5A5 531 aaKnown RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 ZFP28Q8NHY6 868 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 SLC35B2Q8TB61 432 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 TFAP2CQ92754 450 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 EXTL1Q92935 676 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 RGMAQ96B86 450 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 CLIP3Q96DZ5 547 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 CLPTM1LQ96KA5 538 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 MAP3K14Q99558 947 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 MRI1Q9BV20 369 aa3.84□□□□□ -1.79
KNTC1-212ENST00000541466 LSM14BQ9BX40 385 aaKnown RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 CPEB1Q9BZB8 566 aaKnown RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 GTPBP4Q9BZE4 634 aaKnown RBP3.84□□□□□ -1.79
KNTC1-212ENST00000541466 POGKQ9P215 609 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms