RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 C11orf16Q9NQ32 467 aa23.14■■□□□ 1.29
PTMS-205ENST00000540828 SMIM28A0A1B0GU29 152 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 ADH1AP07327 375 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 YARSP54577 528 aaKnown RBP23.13■■□□□ 1.29
PTMS-205ENST00000540828 RARS2Q5T160 578 aaKnown RBP23.13■■□□□ 1.29
PTMS-205ENST00000540828 KANK3Q6NY19 840 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 HAUS6Q7Z4H7 955 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 HSCBQ8IWL3 235 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 RPGRIP1Q96KN7 1286 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 B3GALT6Q96L58 329 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 NECTIN4Q96NY8 510 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 ACAP3Q96P50 834 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 TOPORSQ9NS56 1045 aaPredicted RBP23.13■■□□□ 1.29
PTMS-205ENST00000540828 CCDC39Q9UFE4 941 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 CDH22Q9UJ99 828 aa23.13■■□□□ 1.29
PTMS-205ENST00000540828 SF3B1O75533 1304 aaKnown RBP eCLIP23.12■■□□□ 1.293e-6■■■■■ 44.6
PTMS-205ENST00000540828 FAM13AO94988 1023 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 KIF4AO95239 1232 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 C1RP00736 705 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 SCP2P22307 547 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 MTHFRP42898 656 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 OSTNP61366 133 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 HERC4Q5GLZ8 1057 aaPredicted RBP23.12■■□□□ 1.29
PTMS-205ENST00000540828 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 TMEM31Q5JXX7 168 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 MYCT1Q8N699 235 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 LRFN3Q9BTN0 628 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 PARVGQ9HBI0 331 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.12■■□□□ 1.297e-8■■■□□ 18.1
PTMS-205ENST00000540828 FNIP2Q9P278 1114 aa23.12■■□□□ 1.29
PTMS-205ENST00000540828 TRIP11Q15643 1979 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 KRT18P05783 430 aaKnown RBP23.11■■□□□ 1.29
PTMS-205ENST00000540828 KCNE1P15382 129 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 NASPP49321 788 aaPredicted RBP23.11■■□□□ 1.29
PTMS-205ENST00000540828 ATAT1Q5SQI0 421 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 DCLRE1AQ6PJP8 1040 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 RIN2Q8WYP3 895 aaPredicted RBP23.11■■□□□ 1.29
PTMS-205ENST00000540828 RIPOR3Q96MK2 946 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 STK17AQ9UEE5 414 aa23.11■■□□□ 1.29
PTMS-205ENST00000540828 TMEM189-UBE2V1I3L0A0 370 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 TRAK2O60296 914 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 PDIA4P13667 645 aaKnown RBP23.1■■□□□ 1.29
PTMS-205ENST00000540828 MCL1Q07820 350 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 ELAVL2Q12926 359 aaKnown RBP23.1■■□□□ 1.29
PTMS-205ENST00000540828 NOLC1Q14978 699 aaKnown RBP eCLIP23.1■■□□□ 1.29
PTMS-205ENST00000540828 RRAGBQ5VZM2 374 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 CD300LGQ6UXG3 332 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 KRI1Q8N9T8 703 aaKnown RBP23.1■■□□□ 1.29
PTMS-205ENST00000540828 HASPINQ8TF76 798 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 SNX27Q96L92 541 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 UROC1Q96N76 676 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 FIZ1Q96SL8 496 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 POMKQ9H5K3 350 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 SFXN1Q9H9B4 322 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 MUTYHQ9UIF7 546 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 TBX20Q9UMR3 447 aa23.1■■□□□ 1.29
PTMS-205ENST00000540828 CLDN3O15551 220 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 MEFVO15553 781 aaPredicted RBP23.09■■□□□ 1.29
PTMS-205ENST00000540828 WEE2P0C1S8 567 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 HARSP12081 509 aaKnown RBP23.09■■□□□ 1.29
PTMS-205ENST00000540828 TXLNAP40222 546 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 UPP1Q16831 310 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 RTP2Q5QGT7 225 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 FAM171A1Q5VUB5 890 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 TMC5Q6UXY8 1006 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 GPR149Q86SP6 731 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 LINC00301Q8NCQ3 95 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 ZMAT2Q96NC0 199 aaKnown RBP23.09■■□□□ 1.29
PTMS-205ENST00000540828 TTPALQ9BTX7 342 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 HAPLN2Q9GZV7 340 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 SLC38A7Q9NVC3 462 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 ANKFY1Q9P2R3 1169 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 DPP7Q9UHL4 492 aa23.09■■□□□ 1.29
PTMS-205ENST00000540828 FAM86C2PA6NEL3 165 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 TBCAO75347 108 aaKnown RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 B3GAT3O94766 335 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 GLUD1P00367 558 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 PIGRP01833 764 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 COL9A1P20849 921 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 IGFBP6P24592 240 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 CLCNKBP51801 687 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 CREMQ03060 361 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 SOX4Q06945 474 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 SLC10A6Q3KNW5 377 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 LILRA6Q6PI73 481 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 PRSS55Q6UWB4 352 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 CMASQ8NFW8 434 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 LNX1Q8TBB1 728 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 FEZF2Q8TBJ5 459 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 HDAC7Q8WUI4 952 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 PIK3R5Q8WYR1 880 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 ZNF396Q96N95 335 aaPredicted RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 ZHX3Q9H4I2 956 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 CNTN3Q9P232 1028 aa23.08■■□□□ 1.29
PTMS-205ENST00000540828 TFIP11Q9UBB9 837 aaKnown RBP23.08■■□□□ 1.29
PTMS-205ENST00000540828 K7ENM7 598 aa23.07■■□□□ 1.28
PTMS-205ENST00000540828 GTF2BQ00403 316 aa23.07■■□□□ 1.28
PTMS-205ENST00000540828 STK38Q15208 465 aa23.07■■□□□ 1.28
PTMS-205ENST00000540828 CCDC73Q6ZRK6 1079 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms