RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 PCDHB2Q9Y5E7 798 aa11.56□□□□□ -0.56
ATL3-204ENST00000540699 K7ENM7 598 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 INPPL1O15357 1258 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 TGFB1I1O43294 461 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 TLL1O43897 1013 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 COPB1P53618 953 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 MRPS5P82675 430 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 FKBP3Q00688 224 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 KCNA1Q09470 495 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 STRN3Q13033 797 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 ATF7IP2Q5U623 682 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 PPP2R2DQ66LE6 453 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 VSTM4Q8IW00 320 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 FAM114A1Q8IWE2 563 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 CMTR2Q8IYT2 770 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 SMG8Q8ND04 991 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 CNOT6LQ96LI5 555 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 EIF2AQ9BY44 585 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 THEGQ9P2T0 379 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 USP20Q9Y2K6 914 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 PCDHB7Q9Y5E2 793 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
ATL3-204ENST00000540699 TCF20Q9UGU0 1960 aaKnown RBP11.55□□□□□ -0.56
ATL3-204ENST00000540699 LCHNA4D1U4 455 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 TEX33O43247 280 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 HOXA2O43364 376 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 CALUO43852 315 aaPredicted RBP11.54□□□□□ -0.56
ATL3-204ENST00000540699 TOM1L1O75674 476 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 UPP2O95045 317 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 FGFR1OPO95684 399 aaKnown RBP11.54□□□□□ -0.56
ATL3-204ENST00000540699 LINC00271P0C7V0 271 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 IGFBP4P22692 258 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 MARSP56192 900 aaKnown RBP11.54□□□□□ -0.56
ATL3-204ENST00000540699 CCDC85BQ15834 202 aaPredicted RBP11.54□□□□□ -0.56
ATL3-204ENST00000540699 DCAF4L1Q3SXM0 396 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 CLLU1OSQ5K130 101 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 FILIP1Q7Z7B0 1213 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 SPC24Q8NBT2 197 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 ZBED2Q9BTP6 218 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 CDT1Q9H211 546 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 IPPQ9Y573 584 aa11.54□□□□□ -0.56
ATL3-204ENST00000540699 BRWD1Q9NSI6 2320 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MEIS3P2A8K0S8 358 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 LGALS16A8MUM7 142 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 NPTXRO95502 500 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 TPM3P06753 285 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 CA3P07451 260 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MCF2P10911 925 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 FGFR1P11362 822 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MCL1Q07820 350 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MIIPQ5JXC2 388 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 FAM117BQ6P1L5 589 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 SLC39A4Q6P5W5 647 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MPZL3Q6UWV2 235 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
ATL3-204ENST00000540699 CDR2LQ86X02 465 aaPredicted RBP11.53□□□□□ -0.56
ATL3-204ENST00000540699 ANKRD20A12PQ8NF67 263 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 ADAMTS19Q8TE59 1207 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 CLP1Q92989 425 aaKnown RBP11.53□□□□□ -0.56
ATL3-204ENST00000540699 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 CASD1Q96PB1 797 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 YME1L1Q96TA2 773 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 ADPGKQ9BRR6 497 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 HAPLN2Q9GZV7 340 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 IKZF4Q9H2S9 585 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 NXF3Q9H4D5 531 aaKnown RBP11.53□□□□□ -0.56
ATL3-204ENST00000540699 UBN1Q9NPG3 1134 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 DMAC2Q9NW81 257 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 MAGEC2Q9UBF1 373 aaPredicted RBP11.53□□□□□ -0.56
ATL3-204ENST00000540699 RAPGEFL1Q9UHV5 662 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 STYXL1Q9Y6J8 313 aa11.53□□□□□ -0.56
ATL3-204ENST00000540699 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.56
ATL3-204ENST00000540699 LINC01553A4QN01 128 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GOLGA6L6A8MZA4 724 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 FAM189A1O60320 539 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 OFD1O75665 1012 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 ARHGEF15O94989 841 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GNA14O95837 355 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 NR3C1P04150 777 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 NR2F2P24468 414 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 PLA2G5P39877 138 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GRM5P41594 1212 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 GATMP50440 423 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 TAP1Q03518 808 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 TBX2Q13207 712 aaPredicted RBP11.52□□□□□ -0.57
ATL3-204ENST00000540699 MYBPC2Q14324 1141 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.57
ATL3-204ENST00000540699 FILIP1LQ4L180 1135 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms