RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.31
NPC1-202ENST00000540608 CDAN1Q8IWY9 1227 aa13.15□□□□□ -0.31
NPC1-202ENST00000540608 FLAD1Q8NFF5 587 aa13.15□□□□□ -0.31
NPC1-202ENST00000540608 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.31
NPC1-202ENST00000540608 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.31
NPC1-202ENST00000540608 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.15□□□□□ -0.31
NPC1-202ENST00000540608 COQ4Q9Y3A0 265 aa13.15□□□□□ -0.31
NPC1-202ENST00000540608 TCP11X1B4DZS4 312 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 DHX15O43143 795 aaKnown RBP13.14□□□□□ -0.31
NPC1-202ENST00000540608 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 PLA2G6O60733 806 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TTC4O95801 387 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 MAN1A1P33908 653 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 GPC3P51654 580 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TNIP1Q15025 636 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 LRRC14Q15048 493 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 GALNTL6Q49A17 601 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 KRT39Q6A163 491 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 NSMFQ6X4W1 530 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 MAIP1Q8WWC4 291 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 KIFAP3Q92845 792 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 SNF8Q96H20 258 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 ASIC3Q9UHC3 531 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 BAIAP2L1Q9UHR4 511 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 ZBTB21Q9ULJ3 1066 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 AGAP1Q9UPQ3 857 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TCEA3O75764 348 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 SUN1O94901 812 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 LYPLA2O95372 231 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 IVDP26440 423 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 CHKAP35790 457 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 CAV1Q03135 178 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 SNX1Q13596 522 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 PTK6Q13882 451 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 ZNF268Q14587 947 aaPredicted RBP13.14□□□□□ -0.31
NPC1-202ENST00000540608 E2F5Q15329 346 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
NPC1-202ENST00000540608 LDHDQ86WU2 507 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 TIPINQ9BVW5 301 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 ATP6V0A4Q9HBG4 840 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 ZNF536O15090 1300 aa13.14□□□□□ -0.31
NPC1-202ENST00000540608 UBOX5O94941 541 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CREB1P16220 341 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 QARSP47897 775 aaKnown RBP13.13□□□□□ -0.31
NPC1-202ENST00000540608 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 SNRNP35Q16560 246 aaKnown RBP13.13□□□□□ -0.31
NPC1-202ENST00000540608 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CBWD2Q8IUF1 395 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 GBP7Q8N8V2 638 aaPredicted RBP13.13□□□□□ -0.31
NPC1-202ENST00000540608 MGARPQ8TDB4 240 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CKAP2Q8WWK9 683 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 TMEM8AQ9HCN3 771 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 PKD2L1Q9P0L9 805 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 SLC16A4O15374 487 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CLTAP09496 248 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 ADSSP30520 456 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 HSD17B4P51659 736 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 SLC17A8Q8NDX2 589 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 GRK7Q8WTQ7 553 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 NT5C1BQ96P26 610 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 GLIS2Q9BZE0 524 aaPredicted RBP13.13□□□□□ -0.31
NPC1-202ENST00000540608 CHST7Q9NS84 486 aa13.13□□□□□ -0.31
NPC1-202ENST00000540608 NQO1P15559 274 aaKnown RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 MAPK4P31152 587 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 ITGA8P53708 1063 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 PEX3P56589 373 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 LLGL1Q15334 1064 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 GRIPAP1Q4V328 841 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 N4BP2L2Q92802 583 aaPredicted RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 CNKSR1Q969H4 720 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 CCDC127Q96BQ5 260 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 PLCD4Q9BRC7 762 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 KCNK9Q9NPC2 374 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 ZNF70Q9UC06 446 aaPredicted RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 EXOC7Q9UPT5 735 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 O00370 1275 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 GJB6O95452 261 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
NPC1-202ENST00000540608 NCALDP61601 193 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 BNIP1Q12981 228 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 KYNUQ16719 465 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 NUGGCQ68CJ6 796 aa13.12□□□□□ -0.31
NPC1-202ENST00000540608 TLDC1Q6P9B6 456 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms