RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 DMP1Q13316 513 aaPredicted RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 TMEM119Q4V9L6 283 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 RTP2Q5QGT7 225 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 ELMSAN1Q6PJG2 1045 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 CD300LGQ6UXG3 332 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 OTOP3Q7RTS5 596 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 APBB1IPQ7Z5R6 666 aaPredicted RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 LNX1Q8TBB1 728 aaPredicted RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 RABGGTAQ92696 567 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 ZNF707Q96C28 371 aaPredicted RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 B3GALT6Q96L58 329 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 MRPL4Q9BYD3 311 aaKnown RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 WDR6Q9NNW5 1121 aaKnown RBP14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 KMT5AQ9NQR1 393 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 TSHZ2Q9NRE2 1034 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 ZDHHC7Q9NXF8 308 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 CACNG4Q9UBN1 327 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 SMC3Q9UQE7 1217 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 PIEZO1Q92508 2521 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 NOTCH4Q99466 2003 aa14.41□□□□□ -0.1
SEMA4D-223ENST00000540475 CASTOR2A6NHX0 329 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 CCDC169A6NNP5 214 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 ELAVL2Q12926 359 aaKnown RBP14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 MTMR3Q13615 1198 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 UPP1Q16831 310 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 ARSHQ5FYA8 562 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 LARP1BQ659C4 914 aaKnown RBP14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 PDXDC1Q6P996 788 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 DCLRE1AQ6PJP8 1040 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 CCDC149Q6ZUS6 474 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 ACSF2Q96CM8 615 aaPredicted RBP14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 UROC1Q96N76 676 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 PRRX2Q99811 253 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 CLSTN3Q9BQT9 956 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 TTPALQ9BTX7 342 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 CDT1Q9H211 546 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 LIMD1Q9UGP4 676 aa14.4□□□□□ -0.1
SEMA4D-223ENST00000540475 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 VWA3AA6NCI4 1184 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 RFPL2O75678 378 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 MCF2P10911 925 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 PLS3P13797 630 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 KCNE1P15382 129 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 FGFR3P22607 806 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 SP100P23497 879 aaPredicted RBP14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 NUBP1P53384 320 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 TMEM132AQ24JP5 1023 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 FAM171A1Q5VUB5 890 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 BRAPQ7Z569 592 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 PALB2Q86YC2 1186 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 TMEM161BQ8NDZ6 487 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 PRKD2Q9BZL6 878 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 GDAQ9Y2T3 454 aa14.39□□□□□ -0.11
SEMA4D-223ENST00000540475 SFI1A8K8P3 1242 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 N4BP1O75113 896 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 ZMYND10O75800 440 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 BMP15O95972 392 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 POU2F2P09086 479 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 PLA2G4BP0C869 781 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 MAPTP10636 758 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 LIG1P18858 919 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 SCP2P22307 547 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 IGFBP6P24592 240 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 CLCNKBP51801 687 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 NHLH1Q02575 133 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 IER5LQ5T953 404 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 PRSS55Q6UWB4 352 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 MPZL3Q6UWV2 235 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 ZPBP2Q6X784 338 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 RTL10Q7L3V2 364 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 SUGP1Q8IWZ8 645 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 CEP120Q8N960 986 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 CCDC94Q9BW85 323 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 TARS2Q9BW92 718 aaKnown RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 CNTN3Q9P232 1028 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 IGSF9Q9P2J2 1179 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 EPS15L1Q9UBC2 864 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 FBXW11Q9UKB1 542 aa14.38□□□□□ -0.11
SEMA4D-223ENST00000540475 SLC16A4O15374 487 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 TOM1L1O75674 476 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ASGR2P07307 311 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SPATA31D3P0C874 917 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 RPL17P18621 184 aaKnown RBP14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 AVPR2P30518 371 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 HOXA9P31269 272 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SMTNP53814 917 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 RAB33AQ14088 237 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 PSMD5Q16401 504 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 ZNF568Q3ZCX4 644 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 SPATA31D4Q6ZUB0 917 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 PRSS33Q8NF86 280 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 LRRC15Q8TF66 581 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 STAMQ92783 540 aa14.37□□□□□ -0.11
SEMA4D-223ENST00000540475 NXPE3Q969Y0 559 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms