RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PHLDB2Q86SQ0 1253 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 CEP95Q96GE4 821 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 SLITRK6Q9H5Y7 841 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 EMILIN3Q9NT22 766 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 NYAP2Q9P242 653 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 SNX24Q9Y343 169 aa9.27□□□□□ -0.92
DDB1-217ENST00000540166 MYO9BQ13459 2157 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 MAPK13O15264 365 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 NDUFB10O96000 172 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 HOXA7P31268 230 aaPredicted RBP9.27□□□□□ -0.93
DDB1-217ENST00000540166 STK4Q13043 487 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 MCF2L2Q86YR7 1114 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 NELFCDQ8IXH7 590 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 CENPTQ96BT3 561 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ARMC5Q96C12 935 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ZNF333Q96JL9 665 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 PORCNQ9H237 461 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 CUEDC2Q9H467 287 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 RNPEPL1Q9HAU8 725 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 PAIP2BQ9ULR5 123 aaKnown RBP9.27□□□□□ -0.93
DDB1-217ENST00000540166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.27□□□□□ -0.93
DDB1-217ENST00000540166 TACC3Q9Y6A5 838 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 BRCA1P38398 1863 aaKnown RBP9.27□□□□□ -0.93
DDB1-217ENST00000540166 DLEC1Q9Y238 1755 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ANKRD62A6NC57 917 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 F8VZ95 297 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ABLIM1O14639 778 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 LGR5O75473 907 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 MYL3P08590 195 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 BCRP11274 1271 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 AKR1A1P14550 325 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ATP6V1C1P21283 382 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 SHMT1P34896 483 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 GJC2Q5T442 439 aaPredicted RBP9.27□□□□□ -0.93
DDB1-217ENST00000540166 ARHGEF16Q5VV41 709 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 FYB2Q5VWT5 728 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 ARHGEF18Q6ZSZ5 1173 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 C16orf86Q6ZW13 317 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 KRT25Q7Z3Z0 450 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 KSR1Q8IVT5 923 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 SNX29Q8TEQ0 813 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 TMEM60Q9H2L4 133 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 CPVLQ9H3G5 476 aa9.27□□□□□ -0.93
DDB1-217ENST00000540166 MRPL11Q9Y3B7 192 aaKnown RBP9.27□□□□□ -0.93
DDB1-217ENST00000540166 DYNC1LI2O43237 492 aaPredicted RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 NPTXRO95502 500 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 FGGP02679 453 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 MYL1P05976 194 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PCP11498 1178 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 KLRC1P26715 233 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 SLC16A2P36021 539 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 IL9RQ01113 521 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 SP4Q02446 784 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 EMC10Q5UCC4 262 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 RNF220Q5VTB9 566 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 LCA5Q86VQ0 697 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 CCDC105Q8IYK2 499 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 ST13P4Q8IZP2 240 aaPredicted RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 ARHGAP24Q8N264 748 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 TGS1Q96RS0 853 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 RIOK1Q9BRS2 568 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 MIS12Q9H081 205 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 MMADHCQ9H3L0 296 aaPredicted RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 SLC12A4Q9UP95 1085 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 SSU72P8A0A1W2PR75 194 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 FAM170AA1A519 330 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 KLRF2D3W0D1 207 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 BAG2O95816 211 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 H2AFZP0C0S5 128 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PYGBP11216 843 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 CACNA2D1P54289 1103 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 GPATCH4Q5T3I0 446 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 H2AFVQ71UI9 128 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 TRIM42Q8IWZ5 723 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 FAM133AQ8N9E0 248 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 ERGIC2Q96RQ1 377 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 LRRC27Q9C0I9 530 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 ADAM22Q9P0K1 906 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PDP2Q9P2J9 529 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PPP1R9AQ9ULJ8 1098 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 CNTNAP5Q8WYK1 1306 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 MAGEA13PA6NCF6 341 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 SNX3O60493 162 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 VHLP40337 213 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PEX5P50542 639 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 IRF5Q13568 498 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 SYDE2Q5VT97 1194 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 IRGCQ6NXR0 463 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 MTHFD1LQ6UB35 978 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 CHST13Q8NET6 341 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 PURBQ96QR8 312 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
DDB1-217ENST00000540166 RXFP1Q9HBX9 757 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
DDB1-217ENST00000540166 E7ENQ6 273 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 TXNDC9O14530 226 aa9.25□□□□□ -0.93
DDB1-217ENST00000540166 CIB2O75838 187 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms