RNA–Protein interactions for RNA: ENST00000540162.5

MRPL48-209, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 5

Gene MRPL48, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-209ENST00000540162 HOXA9P31269 272 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 OR1D2P34982 312 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 RARRES1P49788 294 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 PFKPQ01813 784 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 SCRN1Q12765 414 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 NR5A1Q13285 461 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 ZBTB41Q5SVQ8 909 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 TSSK4Q6SA08 328 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 ING5Q8WYH8 240 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 CCDC43Q96MW1 224 aaKnown RBP12.81□□□□□ -0.36
MRPL48-209ENST00000540162 LTB4R2Q9NPC1 389 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 USP20Q9Y2K6 914 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 C2orf16Q68DN1 1984 aa12.81□□□□□ -0.36
MRPL48-209ENST00000540162 SPTLC1O15269 473 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 USO1O60763 962 aaKnown RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 CDKL5O76039 1030 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 TXKP42681 527 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 RAB33AQ14088 237 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 NAB2Q15742 525 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 UVSSAQ2YD98 709 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 PABPC1LQ4VXU2 614 aaKnown RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 PDXDC1Q6P996 788 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 RSPO2Q6UXX9 243 aaPredicted RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 NPAS3Q8IXF0 933 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 ZBTB44Q8NCP5 570 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 MCRS1Q96EZ8 462 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 BORCS6Q96GS4 357 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 CNTNAP3Q9BZ76 1288 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 PLA2G2FQ9BZM2 168 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 TM6SF1Q9BZW5 370 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 FZD8Q9H461 694 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 TTC12Q9H892 705 aaPredicted RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 PRMT7Q9NVM4 692 aaPredicted RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 ZSCAN32Q9NX65 697 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 KCNH3Q9ULD8 1083 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 MRPS23Q9Y3D9 190 aaKnown RBP12.8□□□□□ -0.36
MRPL48-209ENST00000540162 PCDHGA2Q9Y5H1 932 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
MRPL48-209ENST00000540162 RECQL4O94761 1208 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
MRPL48-209ENST00000540162 FGFR3P22607 806 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 TARSP26639 723 aaKnown RBP12.79□□□□□ -0.36
MRPL48-209ENST00000540162 ATXN1P54253 815 aaKnown RBP12.79□□□□□ -0.36
MRPL48-209ENST00000540162 ELAVL2Q12926 359 aaKnown RBP12.79□□□□□ -0.36
MRPL48-209ENST00000540162 CALCRLQ16602 461 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 POTEHQ6S545 545 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 CLDN23Q96B33 292 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 NELL2Q99435 816 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 PDZD7Q9H5P4 517 aa12.79□□□□□ -0.36
MRPL48-209ENST00000540162 COL4A3Q01955 1670 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 N4BP3O15049 544 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 NCAM2O15394 837 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 ECI2O75521 394 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 KRT37O76014 449 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 CTDNEP1O95476 244 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 POU2F2P09086 479 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 LIG1P18858 919 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 ATP2B1P20020 1258 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 KRT2P35908 639 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 MAGEA9P43362 315 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 FZD5Q13467 585 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 PRPF4BQ13523 1007 aaKnown RBP12.78□□□□□ -0.36
MRPL48-209ENST00000540162 FAM187BQ17R55 369 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 TANGO2Q6ICL3 276 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
MRPL48-209ENST00000540162 ZNF852Q6ZMS4 543 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 ZBTB8OSQ8IWT0 167 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 GPR161Q8N6U8 529 aaKnown RBP12.78□□□□□ -0.36
MRPL48-209ENST00000540162 NELL1Q92832 810 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 ORC3Q9UBD5 711 aaPredicted RBP12.78□□□□□ -0.36
MRPL48-209ENST00000540162 MTRRQ9UBK8 725 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 TPCN1Q9ULQ1 816 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 SMG5Q9UPR3 1016 aaKnown RBP12.78□□□□□ -0.36
MRPL48-209ENST00000540162 GDAQ9Y2T3 454 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 WDR81Q562E7 1941 aa12.78□□□□□ -0.36
MRPL48-209ENST00000540162 SHISA7A6NL88 538 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 I3L4J1 428 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 WNT7AO00755 349 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 PFKFB2O60825 505 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 LILRB5O75023 590 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 B3GAT3O94766 335 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 RHOP08100 348 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 SDHBP21912 280 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 CLCNKBP51801 687 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 MTAPQ13126 283 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 SLC5A9Q2M3M2 681 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 EEF1DP3Q658K8 133 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 CDCA2Q69YH5 1023 aaPredicted RBP12.77□□□□□ -0.37
MRPL48-209ENST00000540162 CD300LGQ6UXG3 332 aa12.77□□□□□ -0.37
MRPL48-209ENST00000540162 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms