RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 KREMEN1Q96MU8 473 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 AP5M1Q9H0R1 490 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 TOPORSQ9NS56 1045 aaPredicted RBP18.48■□□□□ 0.55
LTBR-207ENST00000539925 CPSF3Q9UKF6 684 aaKnown RBP18.48■□□□□ 0.55
LTBR-207ENST00000539925 NCANO14594 1321 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 NRCAMQ92823 1304 aa18.48■□□□□ 0.55
LTBR-207ENST00000539925 CES2O00748 559 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ABLIM1O14639 778 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ENC1O14682 589 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 TNPO2O14787 897 aaKnown RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 CA12O43570 354 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 FAM189A1O60320 539 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 PHACTR2O75167 634 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 IGBP1P78318 339 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 TCEAL1Q15170 157 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 DUOXA2Q1HG44 320 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ZNF568Q3ZCX4 644 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 GPIHBP1Q8IV16 184 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 RHOT2Q8IXI1 618 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 LNX1Q8TBB1 728 aaPredicted RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 RFFLQ8WZ73 363 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 TSC1Q92574 1164 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ZNF516Q92618 1163 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 KATNAL1Q9BW62 490 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 B4GALT4O60513 344 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 KPNA6O60684 536 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 F2P00734 622 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 ZNF865P0CJ78 1059 aaPredicted RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 TDRD10Q5VZ19 366 aaKnown RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 TLK2Q86UE8 772 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
LTBR-207ENST00000539925 SMC1BQ8NDV3 1235 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 EPS8L1Q8TE68 723 aa18.47■□□□□ 0.55
LTBR-207ENST00000539925 FAM155AB1AL88 458 aaPredicted RBP18.46■□□□□ 0.55
LTBR-207ENST00000539925 RTN2O75298 545 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 CLTAP09496 248 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 PNMA6AP0CW24 399 aaPredicted RBP18.46■□□□□ 0.55
LTBR-207ENST00000539925 USP8P40818 1118 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 NOP2P46087 812 aaKnown RBP18.46■□□□□ 0.55
LTBR-207ENST00000539925 GALCP54803 685 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 HADHBP55084 474 aaKnown RBP18.46■□□□□ 0.55
LTBR-207ENST00000539925 TEX35Q5T0J7 233 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 CAGE1Q8TC20 777 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 IFT122Q9HBG6 1241 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 SALL4Q9UJQ4 1053 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 PCDHB2Q9Y5E7 798 aa18.46■□□□□ 0.55
LTBR-207ENST00000539925 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
LTBR-207ENST00000539925 BUB1O43683 1085 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 PALMO75781 387 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 IGHA2P01877 340 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 TNNC2P02585 160 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 EDN1P05305 212 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 PAFAH1B1P43034 410 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 FCGRTP55899 365 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 CDR2Q01850 454 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 NCOA4Q13772 614 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 CCDC70Q6NSX1 233 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 ZNF572Q7Z3I7 529 aaPredicted RBP18.45■□□□□ 0.54
LTBR-207ENST00000539925 ZBTB33Q86T24 672 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 TAF4BQ92750 862 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 PACSIN1Q9BY11 444 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 RPF1Q9H9Y2 349 aaKnown RBP18.45■□□□□ 0.54
LTBR-207ENST00000539925 SEPT11Q9NVA2 429 aaKnown RBP18.45■□□□□ 0.54
LTBR-207ENST00000539925 NOCTQ9UK39 431 aaKnown RBP18.45■□□□□ 0.54
LTBR-207ENST00000539925 GJD2Q9UKL4 321 aa18.45■□□□□ 0.54
LTBR-207ENST00000539925 HARSP12081 509 aaKnown RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 MCM3P25205 808 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 MEI1Q5TIA1 1274 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 RPUSD2Q8IZ73 545 aaKnown RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 ANKRD36BP1Q96IX9 119 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 SCLT1Q96NL6 688 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 OSBPL9Q96SU4 736 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 ADPGKQ9BRR6 497 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 PUF60Q9UHX1 559 aaKnown RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 ABT1Q9ULW3 272 aaKnown RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 A0A087WZ62 844 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 GRID2IPA4D2P6 1211 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 CYP26A1O43174 497 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 ERLIN2O94905 339 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 GNAT1P11488 350 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 CYP11B1P15538 503 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 YWHAEP62258 255 aaKnown RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 CUL2Q13617 745 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 SGSM1Q2NKQ1 1148 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 CCDC181Q5TID7 509 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 NFRKBQ6P4R8 1299 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 TRIM72Q6ZMU5 477 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 NT5DC4Q86YG4 428 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 CD302Q8IX05 232 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 TPCN2Q8NHX9 752 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 TATDN2Q93075 761 aa18.44■□□□□ 0.54
LTBR-207ENST00000539925 FDXACB1Q9BRP7 624 aaPredicted RBP18.44■□□□□ 0.54
LTBR-207ENST00000539925 TLR10Q9BXR5 811 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms