RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SDE2Q6IQ49 451 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ITIH5Q86UX2 942 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 C10orf67Q8IYJ2 551 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 BLIDQ8IZY5 108 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 THEM5Q8N1Q8 247 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ENGASEQ8NFI3 743 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 PPP1R9BQ96SB3 815 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 BARHL2Q9NY43 387 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 ORC3Q9UBD5 711 aaPredicted RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 GIT1Q9Y2X7 761 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 PCDHGA2Q9Y5H1 932 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 KNL1Q8NG31 2342 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 KLHL33A6NCF5 533 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 K7ERI5 159 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 SH2B2O14492 632 aaPredicted RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 MEIS2O14770 477 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 DEXIO95424 95 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 LAMP2P13473 410 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 DHPSP49366 369 aaPredicted RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 GRSF1Q12849 480 aaKnown RBP eCLIP8.32□□□□□ -1.08
GNE-205ENST00000539815 GRIK3Q13003 919 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 TSGA10IPQ3SY00 556 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 NEK8Q86SG6 692 aa8.32□□□□□ -1.08
GNE-205ENST00000539815 MRPS31Q92665 395 aaKnown RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 DDX27Q96GQ7 796 aaKnown RBP8.32□□□□□ -1.08
GNE-205ENST00000539815 KIF1CO43896 1103 aaKnown RBP8.31□□□□□ -1.08
GNE-205ENST00000539815 GLP2RO95838 553 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 EMC2Q15006 297 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 RSAD2Q8WXG1 361 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 ZNF689Q96CS4 500 aaPredicted RBP8.31□□□□□ -1.08
GNE-205ENST00000539815 IRAK4Q9NWZ3 460 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 ADD1P35611 737 aaKnown RBP8.31□□□□□ -1.08
GNE-205ENST00000539815 DGKEP52429 567 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 NPEPPSP55786 919 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 NUCB1Q02818 461 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 ARID5AQ03989 594 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 PLA2G4FQ68DD2 849 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 ABHD15Q6UXT9 468 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 Q6ZUG5 572 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 CELF5Q8N6W0 485 aaKnown RBP8.31□□□□□ -1.08
GNE-205ENST00000539815 FAM20AQ96MK3 541 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 CDH22Q9UJ99 828 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 FBXO4Q9UKT5 387 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 NAV1Q8NEY1 1877 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 SGSM2O43147 1006 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 ZMYND10O75800 440 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 DGAT1O75907 488 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 RHOBTB1O94844 696 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 TUSC3Q13454 348 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 PCBP1Q15365 356 aaKnown RBP eCLIP8.31□□□□□ -1.08
GNE-205ENST00000539815 SEC23AQ15436 765 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 CALCRLQ16602 461 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 BTBD8Q5XKL5 378 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 LAIR1Q6GTX8 287 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 SLC22A17Q8WUG5 538 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 SUSD6Q92537 303 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 E2F7Q96AV8 911 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 RMDN1Q96DB5 314 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 TSPAN18Q96SJ8 248 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 CSRNP2Q9H175 543 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 TPCN1Q9ULQ1 816 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 PIAS3Q9Y6X2 628 aa8.31□□□□□ -1.08
GNE-205ENST00000539815 SLC27A2O14975 620 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 TPD52L2O43399 206 aaKnown RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 C22orf31O95567 290 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CFIP05156 583 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 SP9P0CG40 484 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 MAP9Q49MG5 647 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 PIK3AP1Q6ZUJ8 805 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CDR2LQ86X02 465 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 RLFQ13129 1914 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 MED19A0JLT2 244 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 KIF4AO95239 1232 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 AKAP5P24588 427 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 DNAJB1P25685 340 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 ANKRD1Q15327 319 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 UVSSAQ2YD98 709 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 MGAT5BQ3V5L5 792 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 USP39Q53GS9 565 aaKnown RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 SLC27A1Q6PCB7 646 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 RTN4RL1Q86UN2 441 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 RABGGTAQ92696 567 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 MAGED2Q9UNF1 606 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 MYH8P13535 1937 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 H3BQV1 296 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 CYTH3O43739 400 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 PAX3P23760 479 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 NASPP49321 788 aaPredicted RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 PTH1RQ03431 593 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 BYSLQ13895 437 aaKnown RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 CTTNQ14247 550 aaKnown RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 GRM2Q14416 872 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 DHX8Q14562 1220 aaKnown RBP8.3□□□□□ -1.08
GNE-205ENST00000539815 GPNMBQ14956 572 aa8.3□□□□□ -1.08
GNE-205ENST00000539815 TCTN1Q2MV58 587 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms