RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 SELPP16109 830 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 PON1P27169 355 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 FXR1P51114 621 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRAF3-204ENST00000539721 ADKP55263 362 aaKnown RBP17.5■□□□□ 0.39
TRAF3-204ENST00000539721 TRIM60Q495X7 471 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 FIGNQ5HY92 759 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 TRAF7Q6Q0C0 670 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 ANKRD33Q7Z3H0 272 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 WDR49Q8IV35 697 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 ZNF516Q92618 1163 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 CHST12Q9NRB3 414 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 SNTG2Q9NY99 539 aa17.5■□□□□ 0.39
TRAF3-204ENST00000539721 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 TTC26A0AVF1 554 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 PMM2O15305 246 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 MFAP3LO75121 409 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 ACTN1P12814 892 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 CAPN2P17655 700 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 EPC2Q52LR7 807 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 C1orf53Q5VUE5 145 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 SV2AQ7L0J3 742 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 LRRC8DQ7L1W4 858 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 CNGA4Q8IV77 575 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 PAWRQ96IZ0 340 aaKnown RBP17.49■□□□□ 0.39
TRAF3-204ENST00000539721 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 INTS2Q9H0H0 1204 aaKnown RBP17.49■□□□□ 0.39
TRAF3-204ENST00000539721 PLCB1Q9NQ66 1216 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 CAPN11Q9UMQ6 739 aa17.49■□□□□ 0.39
TRAF3-204ENST00000539721 A0A1W2PQJ5 194 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 LACTBL1A8MY62 500 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 EPHB6O15197 1021 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 AP3M2P53677 418 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 YARSP54577 528 aaKnown RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 APBA1Q02410 837 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 BIRC3Q13489 604 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 TRIM65Q6PJ69 517 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 TC2NQ8N9U0 490 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 EHBP1Q8NDI1 1231 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 CACTINQ8WUQ7 758 aaKnown RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 FAM84AQ96KN4 292 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 TOX2Q96NM4 488 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 NXF3Q9H4D5 531 aaKnown RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 LUC7L2Q9Y383 392 aaKnown RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 HES2Q9Y543 173 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 RNF225M0QZC1 329 aaPredicted RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 PITPNM1O00562 1244 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 C4BPAP04003 597 aaKnown RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 TLE2Q04725 743 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 SLC10A6Q3KNW5 377 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 HS1BP3Q53T59 392 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 C15orf39Q6ZRI6 1047 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 CACNA2D4Q7Z3S7 1137 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 LRRC8AQ8IWT6 810 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 FBXL13Q8NEE6 735 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 OR5B17Q8NGF7 314 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 ZNF830Q96NB3 372 aaPredicted RBP17.48■□□□□ 0.39
TRAF3-204ENST00000539721 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 GANQ9H2C0 597 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 ATP11BQ9Y2G3 1177 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 IPPQ9Y573 584 aa17.48■□□□□ 0.39
TRAF3-204ENST00000539721 MEFVO15553 781 aaPredicted RBP17.47■□□□□ 0.39
TRAF3-204ENST00000539721 NOL4O94818 638 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 TMEM191BP0C7N4 346 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 KRT9P35527 623 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
TRAF3-204ENST00000539721 TFAMQ00059 246 aaKnown RBP17.47■□□□□ 0.39
TRAF3-204ENST00000539721 MBTPS1Q14703 1052 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 ZACNQ401N2 412 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 KLHDC7AQ5VTJ3 777 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 TDRD10Q5VZ19 366 aaKnown RBP17.47■□□□□ 0.39
TRAF3-204ENST00000539721 CD302Q8IX05 232 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 EFCAB13Q8IY85 973 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 ZNF397Q8NF99 534 aaPredicted RBP17.47■□□□□ 0.39
TRAF3-204ENST00000539721 TAS1R2Q8TE23 839 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 ANKRD36BP1Q96IX9 119 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 ASB7Q9H672 318 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 SIX2Q9NPC8 291 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 CEP72Q9P209 647 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 COQ4Q9Y3A0 265 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 TRIP11Q15643 1979 aa17.47■□□□□ 0.39
TRAF3-204ENST00000539721 PHACTR2O75167 634 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 ZBED6P86452 979 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 DUOXA2Q1HG44 320 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 JADE1Q6IE81 842 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 DPY19L2P1Q6NXN4 242 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 NECAB2Q7Z6G3 386 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 SMG8Q8ND04 991 aaKnown RBP17.46■□□□□ 0.39
TRAF3-204ENST00000539721 LMO3Q8TAP4 145 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 EDEM3Q9BZQ6 932 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 MTMR12Q9C0I1 747 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 KCNF1Q9H3M0 494 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 NLRC4Q9NPP4 1024 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 FAM105AQ9NUU6 356 aa17.46■□□□□ 0.39
TRAF3-204ENST00000539721 RAB20Q9NX57 234 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms