RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 DNAJB4Q9UDY4 337 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 EXOC7Q9UPT5 735 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 GIT1Q9Y2X7 761 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 INSL6Q9Y581 213 aa14.17□□□□□ -0.14
CCDC42-202ENST00000539522 LACTBL1A8MY62 500 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 F8W810 466 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 POMCP01189 267 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 DNAJB2P25686 324 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 PBX3P40426 434 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 TYRO3Q06418 890 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 SPAG1Q07617 926 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 DSC1Q08554 894 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 ZBTB6Q15916 424 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 NFIL3Q16649 462 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 NOMO2Q5JPE7 1267 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 GLRA4Q5JXX5 417 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 TTI2Q6NXR4 508 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 ARMCX5Q6P1M9 558 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 CD300LGQ6UXG3 332 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 STXBP4Q6ZWJ1 553 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 TMEM173Q86WV6 379 aaPredicted RBP14.16□□□□□ -0.14
CCDC42-202ENST00000539522 SLC9A9Q8IVB4 645 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 BCL7CQ8WUZ0 217 aaPredicted RBP14.16□□□□□ -0.14
CCDC42-202ENST00000539522 CLP1Q92989 425 aaKnown RBP14.16□□□□□ -0.14
CCDC42-202ENST00000539522 CCDC47Q96A33 483 aaKnown RBP14.16□□□□□ -0.14
CCDC42-202ENST00000539522 PGBD4Q96DM1 585 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 EEF2KMTQ96G04 330 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 YME1L1Q96TA2 773 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 PAAF1Q9BRP4 392 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 FAM213AQ9BRX8 229 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 C17orf80Q9BSJ5 609 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 NRDE2Q9H7Z3 1164 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 ANO10Q9NW15 660 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 PARP2Q9UGN5 583 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 LRFN2Q9ULH4 789 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 INPP5FQ9Y2H2 1132 aa14.16□□□□□ -0.14
CCDC42-202ENST00000539522 SMIM28A0A1B0GU29 152 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 EXTL3O43909 919 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 NR3C1P04150 777 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 CLTAP09496 248 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 KCNE1P15382 129 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 CYP2J2P51589 502 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 NLRP12P59046 1061 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 MCCD1P59942 119 aaPredicted RBP14.15□□□□□ -0.14
CCDC42-202ENST00000539522 C1orf220Q5T0J3 134 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 SLFN12LQ6IEE8 588 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 EFCAB13Q8IY85 973 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 COLGALT2Q8IYK4 626 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 CXorf38Q8TB03 319 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 P2RX5Q93086 422 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 C18orf25Q96B23 403 aaPredicted RBP14.15□□□□□ -0.14
CCDC42-202ENST00000539522 BORCS6Q96GS4 357 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 ACAP3Q96P50 834 aa14.15□□□□□ -0.14
CCDC42-202ENST00000539522 AKAP3O75969 853 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 EFEMP2O95967 443 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 NFICP08651 508 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 CCNE1P24864 410 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 MATR3P43243 847 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 MRE11P49959 708 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 SNRPFP62306 86 aaKnown RBP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 BTG3Q14201 252 aaPredicted RBP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 STX1AQ16623 288 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 C11orf57Q6ZUT1 292 aaPredicted RBP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 BRSK2Q8IWQ3 736 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 GPD1LQ8N335 351 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 NELFBQ8WX92 580 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 RABGGTAQ92696 567 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
CCDC42-202ENST00000539522 VN1R3Q9BXE9 311 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 GOLGA2P5Q9HBQ8 144 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 TUBGCP4Q9UGJ1 667 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 CTNND2Q9UQB3 1225 aa14.14□□□□□ -0.15
CCDC42-202ENST00000539522 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 ITGB1P05556 798 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 SLC11A1P49279 550 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 FXR1P51114 621 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCDC42-202ENST00000539522 GUCY2FP51841 1108 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 STX17P56962 302 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 DLG4P78352 724 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 SNRNP35Q16560 246 aaKnown RBP14.13□□□□□ -0.15
CCDC42-202ENST00000539522 EDRF1Q3B7T1 1238 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 KLHL10Q6JEL2 608 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 IRF2BP1Q8IU81 584 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 XXYLT1Q8NBI6 393 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 RDH13Q8NBN7 331 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 C3orf58Q8NDZ4 430 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 TIFAQ96CG3 184 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 MFSD14AQ96MC6 490 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 NAT10Q9H0A0 1025 aaKnown RBP14.13□□□□□ -0.15
CCDC42-202ENST00000539522 RBSNQ9H1K0 784 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 CERS4Q9HA82 394 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 PDE11AQ9HCR9 933 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 UBN1Q9NPG3 1134 aa14.13□□□□□ -0.15
CCDC42-202ENST00000539522 MARCH5Q9NX47 278 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms