RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 HELQQ8TDG4 1101 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 TATDN2Q93075 761 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 CPB2Q96IY4 423 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 AP5M1Q9H0R1 490 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 RAB20Q9NX57 234 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 SALL4Q9UJQ4 1053 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 MYO6Q9UM54 1294 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 Q9Y3F1 56 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 PCDHA13Q9Y5I0 950 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 MBLAC1A4D2B0 266 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 KIAA0391O15091 583 aaKnown RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 TREHO43280 583 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 VNN1O95497 513 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 TNNI1P19237 187 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 TMOD1P28289 359 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 SOX5P35711 763 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 PRKCIP41743 596 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 PHKA2P46019 1235 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 OSTNP61366 133 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 KRT83P78385 493 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 ZACNQ401N2 412 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 ARHGAP29Q52LW3 1261 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 PDCL2Q8N4E4 241 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 NLRP7Q8WX94 980 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 CDT1Q9H211 546 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 ADAMTS10Q9H324 1103 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 CPSF3Q9UKF6 684 aaKnown RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 TRIP12Q14669 1992 aaPredicted RBP12.02□□□□□ -0.49
CTCFL-212ENST00000539382 NRCAMQ92823 1304 aa12.02□□□□□ -0.49
CTCFL-212ENST00000539382 RRN3P2A6NIE6 340 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 OGTO15294 1046 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 GPR32O75388 356 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
CTCFL-212ENST00000539382 ARF4P18085 180 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-212ENST00000539382 CCND3P30281 292 aaPredicted RBP12.01□□□□□ -0.49
CTCFL-212ENST00000539382 GTF2H1P32780 548 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 VAV2P52735 878 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 ZNF568Q3ZCX4 644 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 ZNF569Q5MCW4 686 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 CCDC122Q5T0U0 273 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 KIAA1328Q86T90 577 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 FNBP1Q96RU3 617 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 SYT11Q9BT88 431 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 ACP6Q9NPH0 428 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 GINS2Q9Y248 185 aa12.01□□□□□ -0.49
CTCFL-212ENST00000539382 FAM170AA1A519 330 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 STAT1P42224 750 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 VEGFBP49765 207 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 ENPEPQ07075 957 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 CETN1Q12798 172 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
CTCFL-212ENST00000539382 SPA17Q15506 151 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 SLC18A3Q16572 532 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 GNASQ5JWF2 1037 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 MFSD14CQ5VZR4 134 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 SPOPLQ6IQ16 392 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 BRSK2Q8IWQ3 736 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 SLC35F6Q8N357 371 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 PPM1KQ8N3J5 372 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 CD99L2Q8TCZ2 262 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 JAKMIP2Q96AA8 810 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12□□□□□ -0.49
CTCFL-212ENST00000539382 CCDC94Q9BW85 323 aaPredicted RBP12□□□□□ -0.49
CTCFL-212ENST00000539382 PACSIN1Q9BY11 444 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 TNFSF13BQ9Y275 285 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 DDX3XO00571 662 aaKnown RBP eCLIP12□□□□□ -0.498e-11■■■■□ 20.5
CTCFL-212ENST00000539382 GJA9P57773 515 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 ZNF662Q6ZS27 426 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 DNAJB3Q8WWF6 145 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 DHX38Q92620 1227 aaKnown RBP12□□□□□ -0.49
CTCFL-212ENST00000539382 PDZD7Q9H5P4 517 aa12□□□□□ -0.49
CTCFL-212ENST00000539382 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
CTCFL-212ENST00000539382 MACROD2A1Z1Q3 448 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 KIF5CO60282 957 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 TSPAN1O60635 241 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 CST3P01034 146 aaPredicted RBP11.99□□□□□ -0.49
CTCFL-212ENST00000539382 HLA-DRAP01903 254 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 CYP2C9P11712 490 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 HOXC8P31273 242 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 MAGEA1P43355 309 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 USP37Q86T82 979 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 PALB2Q86YC2 1186 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 LRRN4CLQ8ND94 238 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 LNX1Q8TBB1 728 aaPredicted RBP11.99□□□□□ -0.49
CTCFL-212ENST00000539382 TMEM40Q8WWA1 233 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 CGRRF1Q99675 332 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 APOBEC3GQ9HC16 384 aaKnown RBP11.99□□□□□ -0.49
CTCFL-212ENST00000539382 NENFQ9UMX5 172 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 SEPT4O43236 478 aa11.99□□□□□ -0.49
CTCFL-212ENST00000539382 IPO7O95373 1038 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms