RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 DCAF4L1Q3SXM0 396 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 FAM171A1Q5VUB5 890 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 FAM184AQ8NB25 1140 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 FLCNQ8NFG4 579 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-206ENST00000538970 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 KIFAP3Q92845 792 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 ZSCAN31Q96LW9 406 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-206ENST00000538970 CNTNAP3BQ96NU0 1288 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 CLSTN3Q9BQT9 956 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 CNTNAP3Q9BZ76 1288 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 PIDD1Q9HB75 910 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 SH2B1Q9NRF2 756 aaPredicted RBP13.79□□□□□ -0.2
VAMP1-206ENST00000538970 LRWD1Q9UFC0 647 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 FBXW11Q9UKB1 542 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 NOL7Q9UMY1 257 aaKnown RBP13.79□□□□□ -0.2
VAMP1-206ENST00000538970 GVINP1Q7Z2Y8 2422 aa13.79□□□□□ -0.2
VAMP1-206ENST00000538970 U2AF2P26368 475 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAMP1-206ENST00000538970 EFNA5P52803 228 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 PSMD5Q16401 504 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 NT5DC1Q5TFE4 455 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 ATF7IP2Q5U623 682 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 GET4Q7L5D6 327 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-206ENST00000538970 SIX5Q8N196 739 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 IGSF22Q8N9C0 903 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 SNX29Q8TEQ0 813 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 KIF2CQ99661 725 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 DDX19AQ9NUU7 478 aaKnown RBP13.78□□□□□ -0.2
VAMP1-206ENST00000538970 DAXXQ9UER7 740 aaPredicted RBP13.78□□□□□ -0.2
VAMP1-206ENST00000538970 FBXL21Q9UKT6 434 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 KIAA1024Q9UPX6 916 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 GDAQ9Y2T3 454 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
VAMP1-206ENST00000538970 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PI15O43692 258 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 CFHP08603 1231 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 LAMP2P13473 410 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 TOB1P50616 345 aaPredicted RBP13.77□□□□□ -0.21
VAMP1-206ENST00000538970 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PTGDRQ13258 359 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PDIA5Q14554 519 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 GLRA4Q5JXX5 417 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 LIN9Q5TKA1 542 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 CEP57Q86XR8 500 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 NXPE3Q969Y0 559 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PPP1R10Q96QC0 940 aaKnown RBP13.77□□□□□ -0.21
VAMP1-206ENST00000538970 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
VAMP1-206ENST00000538970 WNT16Q9UBV4 365 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 PCDHB6Q9Y5E3 794 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 ZNF292O60281 2723 aa13.77□□□□□ -0.21
VAMP1-206ENST00000538970 ANHXE9PGG2 379 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 ADAM12O43184 909 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 C8AP07357 584 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 HNRNPA1P09651 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
VAMP1-206ENST00000538970 SRFP11831 508 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 HOXA9P31269 272 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 HTR4Q13639 388 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 PDXDC1Q6P996 788 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 CCDC105Q8IYK2 499 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 DAW1Q8N136 415 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 RTP3Q9BQQ7 232 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 RAB34Q9BZG1 259 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 TNFSF13BQ9Y275 285 aa13.76□□□□□ -0.21
VAMP1-206ENST00000538970 KRBA1A5PL33 1030 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 PP2D1A8MPX8 630 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 E9PMD0 336 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 K7ERI5 159 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 LAD1O00515 517 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 FGFR3P22607 806 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 FSHRP23945 695 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 IGFBP6P24592 240 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-206ENST00000538970 GRM5P41594 1212 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 NPTX2P47972 431 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 CLCNKBP51801 687 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 IL17AQ16552 155 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 PPM1LQ5SGD2 360 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-206ENST00000538970 GRASPQ7Z6J2 395 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-206ENST00000538970 CEP120Q8N960 986 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 UROC1Q96N76 676 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 CDT1Q9H211 546 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 GOLGA2P5Q9HBQ8 144 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 ARHGAP28Q9P2N2 729 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 ZFP37Q9Y6Q3 630 aaPredicted RBP13.75□□□□□ -0.21
VAMP1-206ENST00000538970 NUMBLQ9Y6R0 609 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 FRYLO94915 3013 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 CACNA1BQ00975 2339 aa13.75□□□□□ -0.21
VAMP1-206ENST00000538970 MTCL1Q9Y4B5 1905 aaKnown RBP13.74□□□□□ -0.21
VAMP1-206ENST00000538970 CCDC169A6NNP5 214 aa13.74□□□□□ -0.21
VAMP1-206ENST00000538970 HIP1RO75146 1068 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms