RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TOPORSQ9NS56 1045 aaPredicted RBP15.35■□□□□ 0.05
CD4-208ENST00000538827 PADI3Q9ULW8 664 aa15.35■□□□□ 0.05
CD4-208ENST00000538827 MUC3AQ02505 3323 aa15.35■□□□□ 0.05
CD4-208ENST00000538827 UMODL1Q5DID0 1318 aa15.35■□□□□ 0.05
CD4-208ENST00000538827 PDCD11Q14690 1871 aaKnown RBP15.35■□□□□ 0.05
CD4-208ENST00000538827 LRRIQ3A6PVS8 624 aaPredicted RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 GOLGA6L6A8MZA4 724 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 CLSTN1O94985 981 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 CLTBP09497 229 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 ZSCAN20P17040 1043 aaPredicted RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 DEKP35659 375 aaKnown RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 GRM5P41594 1212 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 FAAP100Q0VG06 881 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 MBTPS1Q14703 1052 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 NR1I3Q14994 352 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 PSMD6Q15008 389 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 TJAP1Q5JTD0 557 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 TRAF7Q6Q0C0 670 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 VSTM4Q8IW00 320 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 TMEM192Q8IY95 271 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 CGRRF1Q99675 332 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 LBHD1Q9BQE6 289 aaPredicted RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 NXF3Q9H4D5 531 aaKnown RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 PDE11AQ9HCR9 933 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 TMEM39AQ9NV64 488 aa15.34■□□□□ 0.05
CD4-208ENST00000538827 CPSF3Q9UKF6 684 aaKnown RBP15.34■□□□□ 0.05
CD4-208ENST00000538827 TRIP11Q15643 1979 aa15.33■□□□□ 0.05
CD4-208ENST00000538827 PITPNM1O00562 1244 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 FAM189A1O60320 539 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 STX10O60499 249 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 N4BP1O75113 896 aaKnown RBP15.33■□□□□ 0.04
CD4-208ENST00000538827 CLTAP09496 248 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 TNNI1P19237 187 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 GCLMP48507 274 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 MXI1P50539 228 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 CCL23P55773 120 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 WNT7BP56706 349 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 SYCP1Q15431 976 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 ENOX2Q16206 610 aaKnown RBP15.33■□□□□ 0.04
CD4-208ENST00000538827 KYAT1Q16773 422 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 UBXN11Q5T124 520 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 C1orf53Q5VUE5 145 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 TMC2Q8TDI7 906 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 SCLYQ96I15 445 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 FAM84AQ96KN4 292 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 TOX2Q96NM4 488 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 ACAP3Q96P50 834 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 LSM14BQ9BX40 385 aaKnown RBP15.33■□□□□ 0.04
CD4-208ENST00000538827 SNTG2Q9NY99 539 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 PARP2Q9UGN5 583 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 HES2Q9Y543 173 aa15.33■□□□□ 0.04
CD4-208ENST00000538827 LRRC10BA6NIK2 292 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 IL18RAPO95256 599 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 HOXD11P31277 338 aaPredicted RBP15.32■□□□□ 0.04
CD4-208ENST00000538827 CYP2C18P33260 490 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 FMO5P49326 533 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 KLK7P49862 253 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
CD4-208ENST00000538827 PPP3CAQ08209 521 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 SURF1Q15526 300 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 HACE1Q8IYU2 909 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 POP1Q99575 1024 aaKnown RBP15.32■□□□□ 0.04
CD4-208ENST00000538827 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 IFIH1Q9BYX4 1025 aaKnown RBP15.32■□□□□ 0.04
CD4-208ENST00000538827 GCNT4Q9P109 453 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 IPPQ9Y573 584 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
CD4-208ENST00000538827 MGEA5O60502 916 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 RECQL4O94761 1208 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 BIRC3Q13489 604 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 CBWD6Q4V339 395 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 CBWD3Q5JTY5 395 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 CBWD5Q5RIA9 395 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 C1orf220Q5T0J3 134 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 SPECC1LQ69YQ0 1117 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 GBP6Q6ZN66 633 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 RNF169Q8NCN4 708 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 ADAM2Q99965 735 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 WNT8AQ9H1J5 351 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 CHST12Q9NRB3 414 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 TBX21Q9UL17 535 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 PTPRJQ12913 1337 aa15.31■□□□□ 0.04
CD4-208ENST00000538827 A0A1W2PQC6 194 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 LACTBL1A8MY62 500 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 NBNO60934 754 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 NFICP08651 508 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 AKAP5P24588 427 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PBX1P40424 430 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 PIK3CAP42336 1068 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 RAB27AP51159 221 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 TFAMQ00059 246 aaKnown RBP15.3■□□□□ 0.04
CD4-208ENST00000538827 CETN1Q12798 172 aa15.3■□□□□ 0.04
CD4-208ENST00000538827 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms