RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 LONP1P36776 959 aaKnown RBP16.42■□□□□ 0.22
RAB40B-202ENST00000538809 GRM5P41594 1212 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 ZXDAP98168 799 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 KARSQ15046 597 aaKnown RBP16.42■□□□□ 0.22
RAB40B-202ENST00000538809 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 ATAT1Q5SQI0 421 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 SPATA31D4Q6ZUB0 917 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 APBB1IPQ7Z5R6 666 aaPredicted RBP16.42■□□□□ 0.22
RAB40B-202ENST00000538809 GPBP1Q86WP2 473 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 PALB2Q86YC2 1186 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 TDRD5Q8NAT2 981 aaKnown RBP16.42■□□□□ 0.22
RAB40B-202ENST00000538809 RASSF8Q8NHQ8 419 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 C17orf75Q9HAS0 396 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 GOLGA2P5Q9HBQ8 144 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 PTPRHQ9HD43 1115 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 BLOC1S4Q9NUP1 217 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 ANKFY1Q9P2R3 1169 aa16.42■□□□□ 0.22
RAB40B-202ENST00000538809 MORC2Q9Y6X9 1032 aaPredicted RBP16.42■□□□□ 0.22
RAB40B-202ENST00000538809 MUC6Q6W4X9 2439 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 ABLIM1O14639 778 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 PLCG1P19174 1290 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 IGFBP6P24592 240 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 UBA7P41226 1012 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 ARSHQ5FYA8 562 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 FAM171A1Q5VUB5 890 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 MPZL3Q6UWV2 235 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 GPR149Q86SP6 731 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 TMEM161BQ8NDZ6 487 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 ZBTB45Q96K62 511 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 PPP1R10Q96QC0 940 aaKnown RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 NTPCRQ9BSD7 190 aaKnown RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 KCND2Q9NZV8 630 aa16.41■□□□□ 0.22
RAB40B-202ENST00000538809 RBM19Q9Y4C8 960 aaKnown RBP16.41■□□□□ 0.22
RAB40B-202ENST00000538809 NOTCH4Q99466 2003 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 TMEM221A6NGB7 291 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 M0R296 226 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 STX6O43752 255 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 RFPL2O75678 378 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 MAPTP10636 758 aaKnown RBP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 MCF2P10911 925 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 PROZP22891 400 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 YARSP54577 528 aaKnown RBP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SOX4Q06945 474 aaPredicted RBP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 STRN3Q13033 797 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 MCM6Q14566 821 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SEZ6Q53EL9 994 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SPECC1Q5M775 1068 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 CCDC149Q6ZUS6 474 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 KCNN1Q92952 543 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SNX27Q96L92 541 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 REEP2Q9BRK0 252 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 TCHPQ9BT92 498 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 CCSER1Q9C0I3 900 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 DAXXQ9UER7 740 aaPredicted RBP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 FBXO2Q9UK22 296 aaPredicted RBP16.4■□□□□ 0.22
RAB40B-202ENST00000538809 TSC2P49815 1807 aa16.4■□□□□ 0.22
RAB40B-202ENST00000538809 SMIM28A0A1B0GU29 152 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 TGM5O43548 720 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 ASGR2P07307 311 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 MARCKSP29966 332 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-202ENST00000538809 CLCNKBP51801 687 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 SMTNP53814 917 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 CEBPZQ03701 1054 aaKnown RBP16.39■□□□□ 0.21
RAB40B-202ENST00000538809 NOLC1Q14978 699 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAB40B-202ENST00000538809 PSMD5Q16401 504 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 C3orf58Q8NDZ4 430 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 RAD54LQ92698 747 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 USP28Q96RU2 1077 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 TTPALQ9BTX7 342 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 SMOC2Q9H3U7 446 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 TOPORSQ9NS56 1045 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-202ENST00000538809 FNIP2Q9P278 1114 aa16.39■□□□□ 0.21
RAB40B-202ENST00000538809 SRPRBQ9Y5M8 271 aaKnown RBP16.39■□□□□ 0.21
RAB40B-202ENST00000538809 CCDC195A0A1B0GUA6 201 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 I3L4J1 428 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 K7ENM7 598 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 B3GAT3O94766 335 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 FAM13AO94988 1023 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 PLA2G5P39877 138 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 CREMQ03060 361 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 SIGLEC14Q08ET2 396 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 ELMSAN1Q6PJG2 1045 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 C15orf39Q6ZRI6 1047 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 KREMEN2Q8NCW0 462 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 CMASQ8NFW8 434 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-202ENST00000538809 PIK3R5Q8WYR1 880 aa16.38■□□□□ 0.21
RAB40B-202ENST00000538809 SMG7Q92540 1137 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms