RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 PBX1P40424 430 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 TNFSF9P41273 254 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 OSTNP61366 133 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 MYBPC2Q14324 1141 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 C9orf50Q5SZB4 431 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 CRELD2Q6UXH1 353 aaPredicted RBP18.73■□□□□ 0.59
CLN6-202ENST00000538696 GPD1LQ8N335 351 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 LPPQ93052 612 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 TUBGCP2Q9BSJ2 902 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
CLN6-202ENST00000538696 CXXC1Q9P0U4 656 aaPredicted RBP18.73■□□□□ 0.59
CLN6-202ENST00000538696 CETN3O15182 167 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 MEFVO15553 781 aaPredicted RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 EXTL3O43909 919 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 AMHP03971 560 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 STAG3L1P0CL83 205 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 ACOT2P49753 483 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 ADAM9Q13443 819 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 ARID5BQ14865 1188 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 CCDC40Q4G0X9 1142 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 NPAS4Q8IUM7 802 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 CRIPAKQ8N1N5 446 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 XXYLT1Q8NBI6 393 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 RNF169Q8NCN4 708 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 FBXL18Q96ME1 805 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 ZNF830Q96NB3 372 aaPredicted RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 FAM213AQ9BRX8 229 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 CCDC94Q9BW85 323 aaPredicted RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 ELAC1Q9H777 363 aaKnown RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 RNF19AQ9NV58 838 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 TMEM161AQ9NX61 479 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 IMPACTQ9P2X3 320 aa18.72■□□□□ 0.59
CLN6-202ENST00000538696 CPSF3Q9UKF6 684 aaKnown RBP18.72■□□□□ 0.59
CLN6-202ENST00000538696 EXOC3O60645 756 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 RECQL4O94761 1208 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 LDHAP00338 332 aaKnown RBP18.71■□□□□ 0.59
CLN6-202ENST00000538696 ADRB2P07550 413 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 ITGA4P13612 1032 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 AKAP5P24588 427 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 KCNJ6P48051 423 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 CASP4P49662 377 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 MAN2A1Q16706 1144 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 MIIPQ5JXC2 388 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 RASIP1Q5U651 963 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 AGMOQ6ZNB7 445 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 CBWD2Q8IUF1 395 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 PGBD4Q96DM1 585 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 UBE2OQ9C0C9 1292 aaKnown RBP18.71■□□□□ 0.59
CLN6-202ENST00000538696 KCNF1Q9H3M0 494 aa18.71■□□□□ 0.59
CLN6-202ENST00000538696 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
CLN6-202ENST00000538696 KIAA1671Q9BY89 1806 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 GNA14O95837 355 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 EOMESO95936 686 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 CLTAP09496 248 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 CXCL8P10145 99 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 RPL13P26373 211 aaKnown RBP18.7■□□□□ 0.58
CLN6-202ENST00000538696 UBXN1Q04323 297 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 TBX2Q13207 712 aaPredicted RBP18.7■□□□□ 0.58
CLN6-202ENST00000538696 SHHQ15465 462 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 ENOX2Q16206 610 aaKnown RBP18.7■□□□□ 0.58
CLN6-202ENST00000538696 KYAT1Q16773 422 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 CEP135Q66GS9 1140 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 TMCO2Q7Z6W1 182 aaPredicted RBP18.7■□□□□ 0.58
CLN6-202ENST00000538696 BRSK2Q8IWQ3 736 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 HACE1Q8IYU2 909 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 SNX27Q96L92 541 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 ACAP3Q96P50 834 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 CXCL16Q9H2A7 254 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 PARP2Q9UGN5 583 aa18.7■□□□□ 0.58
CLN6-202ENST00000538696 PES1O00541 588 aaKnown RBP18.69■□□□□ 0.58
CLN6-202ENST00000538696 AKAP3O75969 853 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 TPM2P07951 284 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 FGFR1P11362 822 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 MARSP56192 900 aaKnown RBP18.69■□□□□ 0.58
CLN6-202ENST00000538696 WNT7BP56706 349 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 SNRNP35Q16560 246 aaKnown RBP18.69■□□□□ 0.58
CLN6-202ENST00000538696 VWA3BQ502W6 1294 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 CLLU1OSQ5K130 101 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 SPECC1LQ69YQ0 1117 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 TOP1MTQ969P6 601 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 MTIF3Q9H2K0 278 aaKnown RBP18.69■□□□□ 0.58
CLN6-202ENST00000538696 RSAD1Q9HA92 442 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 KLK14Q9P0G3 267 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 LRFN2Q9ULH4 789 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 PCDHB7Q9Y5E2 793 aa18.69■□□□□ 0.58
CLN6-202ENST00000538696 SLC16A3O15427 465 aaKnown RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 MLH1P40692 756 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 GATMP50440 423 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 GSDMDP57764 484 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 GOLGA8FQ08AF8 430 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 GOLGA8DPQ0D2H9 430 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 LRMPQ12912 555 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 SLC10A6Q3KNW5 377 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 TRIM59Q8IWR1 403 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 RDH13Q8NBN7 331 aa18.68■□□□□ 0.58
CLN6-202ENST00000538696 CACTINQ8WUQ7 758 aaKnown RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 RNPC3Q96LT9 517 aaKnown RBP18.68■□□□□ 0.58
CLN6-202ENST00000538696 SLC9A7Q96T83 725 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms