RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 CYP4A11Q02928 519 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 OCA2Q04671 838 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 STAT4Q14765 748 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CENPUQ71F23 418 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ARMCX6Q7L4S7 300 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF554Q86TJ5 538 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ERICH1Q86X53 443 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 KIAA2013Q8IYS2 634 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DGCR14Q96DF8 476 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CLMNQ96JQ2 1002 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 SMYD2Q9NRG4 433 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 DYTNA2CJ06 578 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 XPO1O14980 1071 aaKnown RBP5.72□□□□□ -1.49
PTPRD-213ENST00000537002 FAM153BP0C7A2 387 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TPBGLP0DKB5 382 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ADD2P35612 726 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 MYBPC3Q14896 1274 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 FAM153CQ494X1 144 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LIN52Q52LA3 116 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 PPP1R15BQ5SWA1 713 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 ACAD11Q709F0 780 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 USP49Q70CQ1 688 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 CKAP2Q8WWK9 683 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 TLE6Q9H808 572 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 EPS15L1Q9UBC2 864 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 FAM153AQ9UHL3 310 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 LNPEPQ9UIQ6 1025 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 MYH10P35580 1976 aa5.72□□□□□ -1.49
PTPRD-213ENST00000537002 COPEO14579 308 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 ATP6V1G1O75348 118 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 S100BP04271 92 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 CD44P16070 742 aaKnown RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 BCAMP50895 628 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 NOP14P78316 857 aaKnown RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 GRIN1Q05586 938 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 PABPC1LQ4VXU2 614 aaKnown RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 EPHA10Q5JZY3 1008 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 RABGAP1LQ5R372 815 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 KCTD17Q8N5Z5 321 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 BHMTQ93088 406 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 HPS3Q969F9 1004 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 CCDC127Q96BQ5 260 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 DNAI2Q9GZS0 605 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 WARS2Q9UGM6 360 aaKnown RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 A0A0G2JLW4 131 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 IQANK1A0A1B0GTG1 560 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 IQCA1LA6NCM1 817 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 hCG_1984214I3L0E3 225 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 MEIS1O00470 390 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 SEC24DO94855 1032 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 TTLL1O95922 423 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 PTDSS1P48651 473 aaKnown RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 PTENP60484 403 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 ZBED8Q8IZ13 594 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 ZNF713Q8N859 430 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.71□□□□□ -1.49
PTPRD-213ENST00000537002 TBCKQ8TEA7 893 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 C7orf25Q9BPX7 421 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 TRABDQ9H4I3 376 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 HACD3Q9P035 362 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 SORCS3Q9UPU3 1222 aa5.71□□□□□ -1.49
PTPRD-213ENST00000537002 ZSCAN5CA6NGD5 496 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 MFAP3P55082 362 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 AP1B1Q10567 949 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ZCWPW2Q504Y3 356 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PDXDC2PQ6P474 469 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 RSBN1LQ6PCB5 846 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 CRLF3Q8IUI8 442 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 TERB1Q8NA31 727 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 JADE3Q92613 823 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 SNF8Q96H20 258 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 CCDC138Q96M89 665 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 SERPINI1Q99574 410 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PCIF1Q9H4Z3 704 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 TMOD4Q9NZQ9 345 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 MGEA5O60502 916 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ATP6V1B1P15313 513 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PSMC2P35998 433 aaKnown RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 KRT17Q04695 432 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 HIC1Q14526 733 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 TRIP10Q15642 601 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 SNX30Q5VWJ9 437 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 AAGABQ6PD74 315 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 WDR60Q8WVS4 1066 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 DACT3Q96B18 629 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 TBC1D23Q9NUY8 699 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 KBTBD4Q9NVX7 518 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PCDHA12Q9UN75 941 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 FRMPD4Q14CM0 1322 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 CYP2D7A0A087X1C5 515 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 KLRF2D3W0D1 207 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 MAN1A2O60476 641 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ESRRBO95718 433 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ANTXR2P58335 489 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 PDCD4Q53EL6 469 aaKnown RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 EAPPQ56P03 285 aaPredicted RBP5.71□□□□□ -1.5
PTPRD-213ENST00000537002 GLYCTKQ8IVS8 523 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ARL10Q8N8L6 244 aa5.71□□□□□ -1.5
PTPRD-213ENST00000537002 ENAHQ8N8S7 591 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms