RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TCF20Q9UGU0 1960 aaKnown RBP14.41□□□□□ -0.1
PRKDC-206ENST00000536429 BDP1A6H8Y1 2624 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 SMIM28A0A1B0GU29 152 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CARNS1A5YM72 827 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 ANKRD63C9JTQ0 380 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 H0YCG3 227 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 MBTPS2O43462 519 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 KIF4AO95239 1232 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 PIGRP01833 764 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 SOD2P04179 222 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 TNFSF9P41273 254 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 LIG4P49917 911 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CASP5P51878 434 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 SOX4Q06945 474 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-206ENST00000536429 KCNA1Q09470 495 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 HSP90AA2PQ14568 343 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-206ENST00000536429 RESP18Q5W5W9 173 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 ATL3Q6DD88 541 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 FUT10Q6P4F1 479 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 ZNF720Q7Z2F6 126 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-206ENST00000536429 MAP4K3Q8IVH8 894 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 FEZF2Q8TBJ5 459 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 LEO1Q8WVC0 666 aaPredicted RBP14.4□□□□□ -0.1
PRKDC-206ENST00000536429 ACAP3Q96P50 834 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 COLEC11Q9BWP8 271 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 APOL5Q9BWW9 433 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CD320Q9NPF0 282 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CD207Q9UJ71 328 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CDH22Q9UJ99 828 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 CFAP45Q9UL16 551 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 HCFC2Q9Y5Z7 792 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 IRAK3Q9Y616 596 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
PRKDC-206ENST00000536429 FRMD3A2A2Y4 597 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 HNRNPDLO14979 420 aaKnown RBP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 POLR2DO15514 142 aaKnown RBP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CLDN3O15551 220 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 FAM189A1O60320 539 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 NR1I2O75469 434 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 PPP1R37O75864 691 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CNPP09543 421 aaKnown RBP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CXCL8P10145 99 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 MYBP10242 640 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 IDEP14735 1019 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 EPCAMP16422 314 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CASP1P29466 404 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 MATR3P43243 847 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 YARSP54577 528 aaKnown RBP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 BECN1Q14457 450 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 SYCE2Q6PIF2 218 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CD300LGQ6UXG3 332 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 TMEM184AQ6ZMB5 413 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 SMRP1Q8NCR6 262 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 GLIS3Q8NEA6 775 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 HPS3Q969F9 1004 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 C18orf25Q96B23 403 aaPredicted RBP14.39□□□□□ -0.11
PRKDC-206ENST00000536429 KLHL5Q96PQ7 755 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 STRA6Q9BX79 667 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 KBTBD4Q9NVX7 518 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 CNTN3Q9P232 1028 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 ADAM28Q9UKQ2 775 aa14.39□□□□□ -0.11
PRKDC-206ENST00000536429 TADA2AO75478 443 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 KCNE1P15382 129 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 GAP43P17677 238 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 CLCNKBP51801 687 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 SPAG1Q07617 926 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 COASYQ13057 564 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 SMAD4Q13485 552 aaKnown RBP14.38□□□□□ -0.11
PRKDC-206ENST00000536429 HERC4Q5GLZ8 1057 aaPredicted RBP14.38□□□□□ -0.11
PRKDC-206ENST00000536429 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 ANKRD54Q6NXT1 300 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 KANK3Q6NY19 840 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 C3orf58Q8NDZ4 430 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 SLC22A17Q8WUG5 538 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 TRIM9Q9C026 710 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 TNMDQ9H2S6 317 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 MRPL44Q9H9J2 332 aaKnown RBP14.38□□□□□ -0.11
PRKDC-206ENST00000536429 MRPL17Q9NRX2 175 aaKnown RBP14.38□□□□□ -0.11
PRKDC-206ENST00000536429 TOPORSQ9NS56 1045 aaPredicted RBP14.38□□□□□ -0.11
PRKDC-206ENST00000536429 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
PRKDC-206ENST00000536429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
PRKDC-206ENST00000536429 A0A0B4J269 797 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 TEX28O15482 410 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 GCNT3O95395 438 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 URODP06132 367 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 ADSSP30520 456 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 GLUD2P49448 558 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 KRT85P78386 507 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 DSG1Q02413 1049 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
PRKDC-206ENST00000536429 UPP1Q16831 310 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 PUS10Q3MIT2 529 aaKnown RBP14.37□□□□□ -0.11
PRKDC-206ENST00000536429 RTP2Q5QGT7 225 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 GRAMD1CQ8IYS0 662 aa14.37□□□□□ -0.11
PRKDC-206ENST00000536429 C12orf76Q8N812 135 aaPredicted RBP14.37□□□□□ -0.11
PRKDC-206ENST00000536429 IQUBQ8NA54 791 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms