RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 ZBTB45Q96K62 511 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 NAPGQ99747 312 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 PDZD7Q9H5P4 517 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 APOBEC3GQ9HC16 384 aaKnown RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 LZTFL1Q9NQ48 299 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 TOPORSQ9NS56 1045 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 RAB20Q9NX57 234 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 RRP15Q9Y3B9 282 aaKnown RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 SH3BP1Q9Y3L3 701 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 PLXNA3P51805 1871 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 COL4A6Q14031 1691 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC169A6NNP5 214 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 FOXN3O00409 490 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 KIF5CO60282 957 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 ATP1A1P05023 1023 aaKnown RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 KRT13P13646 458 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 GNG11P61952 73 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 CYP27A1Q02318 531 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 CRHR2Q13324 411 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 GJC2Q5T442 439 aaPredicted RBP8.63□□□□□ -1.03
COL21A1-212ENST00000535941 SCARA3Q6AZY7 606 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 MPZL3Q6UWV2 235 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 EEPD1Q7L9B9 569 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 CREG2Q8IUH2 290 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 KIAA0319LQ8IZA0 1049 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 TAS1R2Q8TE23 839 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 TLR10Q9BXR5 811 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 XYLT2Q9H1B5 865 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF446Q9NWS9 450 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 RAB21Q9UL25 225 aa8.63□□□□□ -1.03
COL21A1-212ENST00000535941 SMIM35A0A1B0GVV1 85 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GRID2IPA4D2P6 1211 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF233A6NK53 670 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 SORBS3O60504 671 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CYP1A1P04798 512 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TMEM253P0C7T8 217 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PNMA6AP0CW24 399 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GZMAP12544 262 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 UNGP13051 313 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CST5P28325 142 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GCLMP48507 274 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GSCP56915 257 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GJA9P57773 515 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 FMO1Q01740 532 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ERCC6LQ2NKX8 1250 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 REM2Q8IYK8 340 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TRIM58Q8NG06 486 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PACSIN1Q9BY11 444 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 SUCLA2Q9P2R7 463 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TCRBV5S1A1TA0A578 114 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 K7ERI5 159 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 HNRNPDLO14979 420 aaKnown RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 OGTO15294 1046 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PRKCBP05771 671 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 KLRC1P26715 233 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CDH5P33151 784 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 LMAN1P49257 510 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 KLHL30Q0D2K2 578 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 DGKDQ16760 1214 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 MAP3K21Q5TCX8 1036 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 EFCAB12Q6NXP0 572 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CACNA2D4Q7Z3S7 1137 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC91Q7Z6B0 441 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 DEPTORQ8TB45 409 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TRAPPC12Q8WVT3 735 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 POMGNT1Q8WZA1 660 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PCDHB18PQ96TA0 734 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 POP1Q99575 1024 aaKnown RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TARS2Q9BW92 718 aaKnown RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF408Q9H9D4 720 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CPA4Q9UI42 421 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 SNX12Q9UMY4 172 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 KIAA1671Q9BY89 1806 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TSPAN1O60635 241 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 MCF2P10911 925 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 RGS2P41220 211 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF157P51786 506 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 GRIK4Q16099 956 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ENOX2Q16206 610 aaKnown RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 ZNF569Q5MCW4 686 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 LEKR1Q6ZMV7 388 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 SRGAP1Q7Z6B7 1085 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PALB2Q86YC2 1186 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 RASGEF1CQ8N431 466 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PIK3R5Q8WYR1 880 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 KAT5Q92993 513 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 PRMT7Q9NVM4 692 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 TTC7AQ9ULT0 858 aaPredicted RBP8.62□□□□□ -1.03
COL21A1-212ENST00000535941 NRCAMQ92823 1304 aa8.62□□□□□ -1.03
COL21A1-212ENST00000535941 A0A1B0GUA9 196 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 CTAGE9A4FU28 777 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 GOLGA8IPA6NC78 632 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 GOLGA8JA6NMD2 632 aa8.61□□□□□ -1.03
COL21A1-212ENST00000535941 H3BRB1 525 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms