RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 BLOC1S1P78537 153 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 SCAPQ12770 1279 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 FBXO42Q6P3S6 717 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 Q6ZVL8 140 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 SLC44A3Q8N4M1 653 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 SIMC1Q8NDZ2 872 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 TSPEARQ8WU66 669 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 RAX2Q96IS3 184 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 IFT22Q9H7X7 185 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 INSL6Q9Y581 213 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 ATRNL1Q5VV63 1379 aa6.51□□□□□ -1.37
VBP1-203ENST00000535916 ESRRBO95718 433 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
VBP1-203ENST00000535916 ALOX15P16050 662 aaPredicted RBP6.5□□□□□ -1.37
VBP1-203ENST00000535916 CD38P28907 300 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 MPLP40238 635 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 MXRA7P84157 204 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 ERCC6LQ2NKX8 1250 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 COLEC12Q5KU26 742 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 TSHZ3Q63HK5 1081 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 MAPKAPK5Q8IW41 473 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 GPR156Q8NFN8 814 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 OR7D4Q8NG98 312 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 ZSWIM1Q9BR11 485 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 BCO1Q9HAY6 547 aa6.5□□□□□ -1.37
VBP1-203ENST00000535916 ULK1O75385 1050 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 FOSP01100 380 aaPredicted RBP6.49□□□□□ -1.37
VBP1-203ENST00000535916 ECHS1P30084 290 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 MPP3Q13368 585 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 B3GNTL1Q67FW5 361 aaPredicted RBP6.49□□□□□ -1.37
VBP1-203ENST00000535916 ARMC6Q6NXE6 501 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 MED25Q71SY5 747 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 GPR149Q86SP6 731 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 CMIPQ8IY22 773 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 TMEM132CQ8N3T6 1108 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 TGFBRAP1Q8WUH2 860 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 NAF1Q96HR8 494 aaKnown RBP6.49□□□□□ -1.37
VBP1-203ENST00000535916 QRSL1Q9H0R6 528 aaKnown RBP6.49□□□□□ -1.37
VBP1-203ENST00000535916 RSAD1Q9HA92 442 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 ALG13Q9NP73 1137 aaKnown RBP6.49□□□□□ -1.37
VBP1-203ENST00000535916 SALL3Q9BXA9 1300 aa6.49□□□□□ -1.37
VBP1-203ENST00000535916 ZEB2O60315 1214 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 FDXRP22570 491 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 OCA2Q04671 838 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 STRN3Q13033 797 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 AFMIDQ63HM1 303 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 RNF180Q86T96 592 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 FAM98AQ8NCA5 519 aaKnown RBP6.48□□□□□ -1.37
VBP1-203ENST00000535916 FUBP3Q96I24 572 aaKnown RBP eCLIP6.48□□□□□ -1.37
VBP1-203ENST00000535916 Q96MF0 132 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 TTC1Q99614 292 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 MRI1Q9BV20 369 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 ALOXE3Q9BYJ1 711 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 TESQ9UGI8 421 aaKnown RBP6.48□□□□□ -1.37
VBP1-203ENST00000535916 MAST3O60307 1309 aa6.48□□□□□ -1.37
VBP1-203ENST00000535916 CCDC78A2IDD5 438 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 ENPP3O14638 875 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 SREBF1P36956 1147 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 MRPS9P82933 396 aaKnown RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 SP140Q13342 867 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 ADRM1Q16186 407 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 ZKSCAN2Q63HK3 967 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 DDX46Q7L014 1031 aaKnown RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 DRC7Q8IY82 874 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 BOLLQ8N9W6 283 aaKnown RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 AUTS2Q8WXX7 1259 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 UHRF1Q96T88 793 aaPredicted RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 IFT122Q9HBG6 1241 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 DMRT3Q9NQL9 472 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 SCOCQ9UIL1 159 aa6.47□□□□□ -1.37
VBP1-203ENST00000535916 APOBEC2Q9Y235 224 aaKnown RBP6.47□□□□□ -1.37
VBP1-203ENST00000535916 A0A1B0GTW7 788 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 RAP2AP10114 183 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 COL11A2P13942 1736 aaPredicted RBP6.46□□□□□ -1.38
VBP1-203ENST00000535916 MUM1Q2TAK8 710 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 SPDYE7PQ495Y7 208 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 STRA8Q7Z7C7 330 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 THNSL2Q86YJ6 484 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 PQLC1Q8N2U9 271 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 UBR7Q8N806 425 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 STON2Q8WXE9 905 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 HOXB13Q92826 284 aaPredicted RBP6.46□□□□□ -1.38
VBP1-203ENST00000535916 RNF31Q96EP0 1072 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 LDAHQ9H6V9 325 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 TLK1Q9UKI8 766 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 SIK3Q9Y2K2 1263 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 NOX1Q9Y5S8 564 aa6.46□□□□□ -1.38
VBP1-203ENST00000535916 ARHGEF17Q96PE2 2063 aaPredicted RBP6.45□□□□□ -1.38
VBP1-203ENST00000535916 GOLGA8AA7E2F4 631 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 FGFR4P22455 802 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 SLC6A2P23975 617 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 ALDH1A3P47895 512 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 PPP3CAQ08209 521 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 LMBR1Q8WVP7 490 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 FATE1Q969F0 183 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 REXO4Q9GZR2 422 aaKnown RBP6.45□□□□□ -1.38
VBP1-203ENST00000535916 VTA1Q9NP79 307 aa6.45□□□□□ -1.38
VBP1-203ENST00000535916 AATKQ6ZMQ8 1374 aa6.44□□□□□ -1.38
VBP1-203ENST00000535916 PRSS23O95084 383 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms