RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 DBNDD1Q9H9R9 158 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RASA4BC9J798 803 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 POC1B-GALNT4F8VUJ3 575 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RASA4O43374 803 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 PSMD10O75832 226 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 GJB6O95452 261 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 CBX6O95503 412 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 PDHA1P08559 390 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 TAC1P20366 129 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 CCND1P24385 295 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 SSR1P43307 286 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ATP11AP98196 1134 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ZNF568Q3ZCX4 644 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 C15orf52Q6ZUT6 534 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 RPS6KC1Q96S38 1066 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 C12orf65Q9H3J6 166 aaKnown RBP14.31□□□□□ -0.12
HDAC4-214ENST00000535493 PRKAG3Q9UGI9 489 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ANAPC5Q9UJX4 755 aa14.31□□□□□ -0.12
HDAC4-214ENST00000535493 ARHGEF35A5YM69 484 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 GH2P01242 217 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 SERPINB2P05120 415 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 TAF11Q15544 211 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 CAPRIN2Q6IMN6 1127 aaKnown RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 MOXD1Q6UVY6 613 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 TRMT10CQ7L0Y3 403 aaKnown RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 GLIS1Q8NBF1 620 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 PSPC1Q8WXF1 523 aaKnown RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 SERPINB12Q96P63 405 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 GLT8D2Q9H1C3 349 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ZSCAN5DPP0CG00 497 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 KRT5P13647 590 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 HSPA6P17066 643 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 MXI1P50539 228 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ZNF131P52739 623 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 SLC8A3P57103 927 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 CYP1B1Q16678 543 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ANKS1BQ7Z6G8 1248 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 FMNL3Q8IVF7 1028 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 TAB3Q8N5C8 712 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ZNF577Q9BSK1 485 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ROPN1BQ9BZX4 212 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ZC3H12CQ9C0D7 883 aaKnown RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 ROPN1Q9HAT0 212 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 NKIRAS1Q9NYS0 192 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 GRID1Q9ULK0 1009 aa14.3□□□□□ -0.12
HDAC4-214ENST00000535493 COL16A1Q07092 1604 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-214ENST00000535493 G3V3G9 751 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ADRB2P07550 413 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 CYP11B1P15538 503 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ERFP50548 548 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 SESN3P58005 492 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 FASTKD3Q14CZ7 662 aaKnown RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 DCAF8Q5TAQ9 597 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 RC3H1Q5TC82 1133 aaKnown RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 RHBDF2Q6PJF5 856 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 KIAA1683Q9H0B3 1180 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 HSPBP1Q9NZL4 362 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 USP20Q9Y2K6 914 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ATP8B3O60423 1300 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 WDR91A4D1P6 747 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 SLC16A4O15374 487 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ENTPD5O75356 428 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 RALAP11233 206 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ATF2P15336 505 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 MAPK4P31152 587 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 CIITAP33076 1130 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 LMBRD2Q68DH5 695 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 PADI6Q6TGC4 694 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 TTC8Q8TAM2 541 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 SNF8Q96H20 258 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 IFT74Q96LB3 600 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 CHKBQ9Y259 395 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 USTQ9Y2C2 406 aa14.29□□□□□ -0.12
HDAC4-214ENST00000535493 COL5A3P25940 1745 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-214ENST00000535493 BANF1O75531 89 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 UNC5CO95185 931 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 ETS1P14921 441 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 ADRA2BP18089 450 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 EPHB2P29323 1055 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 PRELPP51888 382 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 SOX10P56693 466 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 CETN1Q12798 172 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 KAZNQ674X7 775 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 CCHCR1Q8TD31 782 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 DCAF4Q8WV16 495 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 PI4K2BG5E9Z4 385 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 MAP3K13O43283 966 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 FOSP01100 380 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-214ENST00000535493 CD58P19256 250 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 PSMC4P43686 418 aa14.28□□□□□ -0.12
HDAC4-214ENST00000535493 CRKP46108 304 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms