RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
CLIP1-206ENST00000535290 DNM2P50570 870 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 AP3B2Q13367 1082 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 PSMD5Q16401 504 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 UVSSAQ2YD98 709 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 JAKMIP3Q5VZ66 844 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 VITQ6UXI7 678 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 TMTC3Q6ZXV5 915 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 CEP57Q86XR8 500 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 GAB3Q8WWW8 586 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 PIK3R5Q8WYR1 880 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 TCEAL4Q96EI5 215 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 ZSWIM3Q96MP5 696 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 PAAF1Q9BRP4 392 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 TTPALQ9BTX7 342 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 NIFKQ9BYG3 293 aaKnown RBP9.28□□□□□ -0.92
CLIP1-206ENST00000535290 LNPKQ9C0E8 428 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 VPS45Q9NRW7 570 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-206ENST00000535290 KLK13Q9UKR3 277 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 GREB1Q4ZG55 1949 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 NBEAQ8NFP9 2946 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 ARNTLO00327 626 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 CHMP2AO43633 222 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 CAPNS1P04632 268 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 PSMC3P17980 439 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 CSRP1P21291 193 aaKnown RBP9.27□□□□□ -0.93
CLIP1-206ENST00000535290 VIPR2P41587 438 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 PTH1RQ03431 593 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 RAB33AQ14088 237 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 LRRC32Q14392 662 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 COL28A1Q2UY09 1125 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 PRR16Q569H4 304 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 FAM171A1Q5VUB5 890 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 DAB2IPQ5VWQ8 1189 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 TXNDC11Q6PKC3 985 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 NFXL1Q6ZNB6 911 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 PROSER1Q86XN7 944 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 CNNM3Q8NE01 707 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 HASPINQ8TF76 798 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 LENG9Q96B70 501 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 ASB16Q96NS5 453 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 APOL6Q9BWW8 343 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 MSRB2Q9Y3D2 182 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 NEUROG3Q9Y4Z2 214 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 APC2O95996 2303 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 NCANO14594 1321 aa9.27□□□□□ -0.93
CLIP1-206ENST00000535290 SF3B1O75533 1304 aaKnown RBP eCLIP9.27□□□□□ -0.933e-6■■■■■ 137.9
CLIP1-206ENST00000535290 MYH9P35579 1960 aaKnown RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 SPAG17Q6Q759 2223 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 SLC38A8A6NNN8 435 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 HIP1O00291 1037 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 ZNF263O14978 683 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 MAFO75444 373 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 CCDC192P0DO97 292 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 AKAP5P24588 427 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 OR1D2P34982 312 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 CCR2P41597 374 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 SETQ01105 290 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 PLK5Q496M5 336 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 XKR3Q5GH77 459 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 PRSS36Q5K4E3 855 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 TEX2Q8IWB9 1127 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 PLEKHM2Q8IWE5 1019 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 FANCBQ8NB91 859 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 GJA10Q969M2 543 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 ZC3H10Q96K80 434 aaKnown RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 AVENQ9NQS1 362 aaPredicted RBP9.26□□□□□ -0.93
CLIP1-206ENST00000535290 ANKFY1Q9P2R3 1169 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 PCDHB8Q9UN66 801 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 COL4A3BPQ9Y5P4 624 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 ACACAQ13085 2346 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 BPTFQ12830 3046 aa9.26□□□□□ -0.93
CLIP1-206ENST00000535290 WDFY3Q8IZQ1 3526 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 LOC400499M0QZD8 3231 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 LNP1A1A4G5 178 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 WDR27A2RRH5 827 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CCDC69A6NI79 296 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 SH2B2O14492 632 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CDX4O14627 284 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 KIF4AO95239 1232 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CAVIN2O95810 425 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CALM1P0DP23 149 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CALM2P0DP24 149 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CALM3P0DP25 149 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 PTPN2P17706 415 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 MLLT6P55198 1093 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 CREB5Q02930 508 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 DGKKQ5KSL6 1271 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 PPP1R18Q6NYC8 613 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 PKN3Q6P5Z2 889 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 SRGAP1Q7Z6B7 1085 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 DEFB124Q8NES8 71 aa9.25□□□□□ -0.93
CLIP1-206ENST00000535290 PRPF31Q8WWY3 499 aaKnown RBP9.25□□□□□ -0.93
CLIP1-206ENST00000535290 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms