RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DDCP20711 480 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 ALDH1A3P47895 512 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 MLC1Q15049 377 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 PGS1Q32NB8 556 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 PPP4R3AQ6IN85 833 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 MAMDC4Q6UXC1 1216 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
CASP4-213ENST00000534356 RSPH3Q86UC2 560 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 SGMS1Q86VZ5 419 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 DRC7Q8IY82 874 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 GRAMD1CQ8IYS0 662 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 MAGEB6Q8N7X4 407 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 NSUN6Q8TEA1 469 aaKnown RBP8.29□□□□□ -1.08
CASP4-213ENST00000534356 CASKIN2Q8WXE0 1202 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 ST8SIA2Q92186 375 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 CLIP3Q96DZ5 547 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 TMX3Q96JJ7 454 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 CLPTM1LQ96KA5 538 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 MRGPRX4Q96LA9 322 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 CPPED1Q9BRF8 314 aaPredicted RBP8.29□□□□□ -1.08
CASP4-213ENST00000534356 MOCS1Q9NZB8 636 aa8.29□□□□□ -1.08
CASP4-213ENST00000534356 CNOT11Q9UKZ1 510 aaKnown RBP8.29□□□□□ -1.08
CASP4-213ENST00000534356 CAPN14A8MX76 684 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
CASP4-213ENST00000534356 RAP2AP10114 183 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 HSPA6P17066 643 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 HHEXQ03014 270 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 CSRP2Q16527 193 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 ZNF585AQ6P3V2 769 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 B3GNT9Q6UX72 402 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 DOK3Q7L591 496 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 TTC7BQ86TV6 843 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 FAM83AQ86UY5 434 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 WDR75Q8IWA0 830 aaKnown RBP8.28□□□□□ -1.08
CASP4-213ENST00000534356 MB21D1Q8N884 522 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 CHST13Q8NET6 341 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 MDGA1Q8NFP4 955 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 IFI44Q8TCB0 444 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 MIEF2Q96C03 454 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 C8orf49Q96NF6 230 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 CPEB1Q9BZB8 566 aaKnown RBP8.28□□□□□ -1.08
CASP4-213ENST00000534356 DEF6Q9H4E7 631 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 NMRK2Q9NPI5 230 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 RUVBL1Q9Y265 456 aaKnown RBP8.28□□□□□ -1.08
CASP4-213ENST00000534356 ARHGEF11O15085 1522 aa8.28□□□□□ -1.08
CASP4-213ENST00000534356 CFTRP13569 1480 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 TBKBP1A7MCY6 615 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 B5MCH6 92 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 MFAP3LO75121 409 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 GPRIN1Q7Z2K8 1008 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 C14orf80Q86SX3 495 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 TTC9BQ8N6N2 239 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 SLC35G2Q8TBE7 412 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 FAM89AQ96GI7 184 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 MYOCQ99972 504 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 SMPD4Q9NXE4 827 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 HDAC5Q9UQL6 1122 aa8.27□□□□□ -1.09
CASP4-213ENST00000534356 LRRC14BA6NHZ5 514 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 MARCH6O60337 910 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 IPO13O94829 963 aaKnown RBP8.26□□□□□ -1.09
CASP4-213ENST00000534356 RPLP2P05387 115 aaKnown RBP8.26□□□□□ -1.09
CASP4-213ENST00000534356 U2AF1L5P0DN76 240 aaPredicted RBP8.26□□□□□ -1.09
CASP4-213ENST00000534356 HK1P19367 917 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 U2AF1Q01081 240 aaKnown RBP eCLIP8.26□□□□□ -1.09
CASP4-213ENST00000534356 PTH1RQ03431 593 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 HS1BP3Q53T59 392 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 ANKRD35Q8N283 1001 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 DIS3LQ8TF46 1054 aaKnown RBP8.26□□□□□ -1.09
CASP4-213ENST00000534356 EDAQ92838 391 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 TAAR9Q96RI9 348 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 ADOQ96SZ5 270 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 MRI1Q9BV20 369 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 SLC23A1Q9UHI7 598 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 TCAF1Q9Y4C2 921 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
CASP4-213ENST00000534356 PJA2O43164 708 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 CLRN1P58418 232 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 ZNF280AP59817 542 aaPredicted RBP8.25□□□□□ -1.09
CASP4-213ENST00000534356 CTXN1P60606 82 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 RAB39AQ14964 217 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 BMT2Q1RMZ1 405 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 KHDC1Q4VXA5 237 aaKnown RBP8.25□□□□□ -1.09
CASP4-213ENST00000534356 C1QL3Q5VWW1 255 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 OTUD7BQ6GQQ9 843 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 GSPT2Q8IYD1 628 aaKnown RBP8.25□□□□□ -1.09
CASP4-213ENST00000534356 DCBLD1Q8N8Z6 715 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 OR52N2Q8NGI0 321 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 TTC8Q8TAM2 541 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 ATXN2LQ8WWM7 1075 aaKnown RBP8.25□□□□□ -1.09
CASP4-213ENST00000534356 VRK1Q99986 396 aaPredicted RBP8.25□□□□□ -1.09
CASP4-213ENST00000534356 KRTAP4-2Q9BYR5 136 aa8.25□□□□□ -1.09
CASP4-213ENST00000534356 ALDH2P05091 517 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
CASP4-213ENST00000534356 ATP5JP18859 108 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 HIBADHP31937 336 aaKnown RBP8.24□□□□□ -1.09
CASP4-213ENST00000534356 SELENOPP49908 381 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 RABGGTBP53611 331 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 TLE1Q04724 770 aa8.24□□□□□ -1.09
CASP4-213ENST00000534356 MINDY4Q4G0A6 757 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms