RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 TBC1D17Q9HA65 648 aa18.6■□□□□ 0.57
CAPRIN1-216ENST00000534042 GDAQ9Y2T3 454 aa18.6■□□□□ 0.57
CAPRIN1-216ENST00000534042 USP34Q70CQ2 3546 aa18.6■□□□□ 0.57
CAPRIN1-216ENST00000534042 CFAP54Q96N23 3096 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 ANHXE9PGG2 379 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 MUTP22033 750 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 NAB2Q15742 525 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 DCAF4L1Q3SXM0 396 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 GRASPQ7Z6J2 395 aaPredicted RBP18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 CXCL16Q9H2A7 254 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 FOXP1Q9H334 677 aaPredicted RBP18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 NUMBLQ9Y6R0 609 aa18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 EP300Q09472 2414 aaPredicted RBP18.59■□□□□ 0.57
CAPRIN1-216ENST00000534042 CACNA1IQ9P0X4 2223 aa18.58■□□□□ 0.57
CAPRIN1-216ENST00000534042 GVINP1Q7Z2Y8 2422 aa18.58■□□□□ 0.57
CAPRIN1-216ENST00000534042 C8AP07357 584 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 CCT6AP40227 531 aaKnown RBP18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 EFNA5P52803 228 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 TTC38Q5R3I4 469 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 ST13P5Q8NFI4 369 aaPredicted RBP18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 SNX27Q96L92 541 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 POLD4Q9HCU8 107 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 ARHGEF3Q9NR81 526 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 SLC2A4RGQ9NR83 387 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 PPP4R2Q9NY27 417 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 POLIQ9UNA4 740 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 LIMCH1Q9UPQ0 1083 aa18.58■□□□□ 0.56
CAPRIN1-216ENST00000534042 MYH15Q9Y2K3 1946 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 CCL16O15467 120 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 ADAM12O43184 909 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 XYLBO75191 536 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 EDN1P05305 212 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 HOXA9P31269 272 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 NTHL1P78549 312 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 GNL2Q13823 731 aaKnown RBP18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 PHLDB3Q6NSJ2 640 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 APBB1IPQ7Z5R6 666 aaPredicted RBP18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 ADSSL1Q8N142 457 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 KIFAP3Q92845 792 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 KIFC3Q9BVG8 833 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 CDH7Q9ULB5 785 aa18.57■□□□□ 0.56
CAPRIN1-216ENST00000534042 B3GAT3O94766 335 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 OR1D2P34982 312 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 RAB33AQ14088 237 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 GLRA4Q5JXX5 417 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 NT5DC1Q5TFE4 455 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 ATF7IP2Q5U623 682 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 DCLRE1AQ6PJP8 1040 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 BHMT2Q9H2M3 363 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 SIT1Q9Y3P8 196 aa18.56■□□□□ 0.56
CAPRIN1-216ENST00000534042 TMEM189-UBE2V1I3L0A0 370 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 K7ERI5 159 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 FGFR3P22607 806 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 TRAPPC10P48553 1259 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 FXR2P51116 673 aaKnown RBP eCLIP18.55■□□□□ 0.564e-8■■□□□ 13.3
CAPRIN1-216ENST00000534042 ECM1Q16610 540 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 UVSSAQ2YD98 709 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 AXDND1Q5T1B0 1012 aaPredicted RBP18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 PARM1Q6UWI2 310 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 FBXO18Q8NFZ0 1043 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 SLC7A14Q8TBB6 771 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 FGF13Q92913 245 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 FGF14Q92915 247 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 SHDQ96IW2 340 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 PPP1R10Q96QC0 940 aaKnown RBP18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 RPP25Q9BUL9 199 aaKnown RBP18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 KIAA1024Q9UPX6 916 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 NOTCH4Q99466 2003 aa18.55■□□□□ 0.56
CAPRIN1-216ENST00000534042 TRAPPC3O43617 180 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 DCNP07585 359 aaKnown RBP18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 CLCNKBP51801 687 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 GPC5P78333 572 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 MTSS1LQ765P7 747 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 FAM184AQ8NB25 1140 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 KCNG4Q8TDN1 519 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 UROC1Q96N76 676 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 SEMA4AQ9H3S1 761 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 DDX19AQ9NUU7 478 aaKnown RBP18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 MTRRQ9UBK8 725 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 TNFSF13BQ9Y275 285 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 STK24Q9Y6E0 443 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 CITO14578 2027 aa18.54■□□□□ 0.56
CAPRIN1-216ENST00000534042 MIA3Q5JRA6 1907 aa18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 CCDC169A6NNP5 214 aa18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 POU2F2P09086 479 aa18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 IGFBP6P24592 240 aaPredicted RBP18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 YARSP54577 528 aaKnown RBP18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 PDIA5Q14554 519 aa18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 UPP1Q16831 310 aa18.53■□□□□ 0.56
CAPRIN1-216ENST00000534042 ANKS3Q6ZW76 656 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms