RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 PRKAG3Q9UGI9 489 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 DOCK8Q8NF50 2099 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 ZNF318Q5VUA4 2279 aa10.59□□□□□ -0.71
SSBP3-215ENST00000533946 ZDBF2Q9HCK1 2354 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 DCXO43602 365 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 FAM189A1O60320 539 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 PLS3P13797 630 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 NTHL1P78549 312 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 DSG1Q02413 1049 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 GRIK3Q13003 919 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TUSC3Q13454 348 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 ZNF568Q3ZCX4 644 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TMEM31Q5JXX7 168 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 FAM171A1Q5VUB5 890 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 ARL6IP4Q66PJ3 421 aaKnown RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 DYMQ7RTS9 669 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 CNNM3Q8NE01 707 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 RAD54LQ92698 747 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 CASP10Q92851 521 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 HPS3Q969F9 1004 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 FBXL18Q96ME1 805 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 CDCA3Q99618 268 aaPredicted RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 CLSTN3Q9BQT9 956 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 NTPCRQ9BSD7 190 aaKnown RBP10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 RXFP1Q9HBX9 757 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 MAN1C1Q9NR34 630 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 ADAM28Q9UKQ2 775 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 TNFSF13BQ9Y275 285 aa10.58□□□□□ -0.72
SSBP3-215ENST00000533946 FRYLO94915 3013 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 MYMKA6NI61 221 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 TGM5O43548 720 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 GPR37L1O60883 481 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 TADA2AO75478 443 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 THP07101 528 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 TKTP29401 623 aaKnown RBP10.57□□□□□ -0.72
SSBP3-215ENST00000533946 CASP1P29466 404 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 UBA7P41226 1012 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 GLUD2P49448 558 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 CASP5P51878 434 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 NCKAP1LP55160 1127 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 NCBP1Q09161 790 aaKnown RBP10.57□□□□□ -0.72
SSBP3-215ENST00000533946 DMP1Q13316 513 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-215ENST00000533946 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 PCBP1Q15365 356 aaKnown RBP eCLIP10.57□□□□□ -0.721e-6■■■■□ 22.1
SSBP3-215ENST00000533946 XKR4Q5GH76 650 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 HERC4Q5GLZ8 1057 aaPredicted RBP10.57□□□□□ -0.72
SSBP3-215ENST00000533946 IER5LQ5T953 404 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 LILRA6Q6PI73 481 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 BRAPQ7Z569 592 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 CEP57Q86XR8 500 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 RSAD2Q8WXG1 361 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 PPP2R3CQ969Q6 453 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 SNX27Q96L92 541 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
SSBP3-215ENST00000533946 ANKFY1Q9P2R3 1169 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 KIF3AQ9Y496 699 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 PHLPP2Q6ZVD8 1323 aa10.57□□□□□ -0.72
SSBP3-215ENST00000533946 STX6O43752 255 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 BRD1O95696 1058 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 URODP06132 367 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 CXCL8P10145 99 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 GRM5P41594 1212 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 ZNF131P52739 623 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 EFNA5P52803 228 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 UPP1Q16831 310 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 MPZL3Q6UWV2 235 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 HAUS6Q7Z4H7 955 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 GPR149Q86SP6 731 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 MYCT1Q8N699 235 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 DNAJC19Q96DA6 116 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 CDK5RAP3Q96JB5 506 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 MYADMQ96S97 322 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 COLEC11Q9BWP8 271 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 MRPL4Q9BYD3 311 aaKnown RBP10.56□□□□□ -0.72
SSBP3-215ENST00000533946 RAB34Q9BZG1 259 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 ZDHHC9Q9Y397 364 aa10.56□□□□□ -0.72
SSBP3-215ENST00000533946 SRPRBQ9Y5M8 271 aaKnown RBP10.56□□□□□ -0.72
SSBP3-215ENST00000533946 SCN1AP35498 2009 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 CCDC195A0A1B0GUA6 201 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 LACTBL1A8MY62 500 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 HOXB8P17481 243 aaPredicted RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 LONP1P36776 959 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 VCPP55072 806 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 ZXDAP98168 799 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 SLC39A14Q15043 492 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 ENOX2Q16206 610 aaKnown RBP10.55□□□□□ -0.72
SSBP3-215ENST00000533946 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 DCAF4L1Q3SXM0 396 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 SFR1Q86XK3 245 aa10.55□□□□□ -0.72
SSBP3-215ENST00000533946 PDILTQ8N807 584 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms