RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GGA2Q9UJY4 613 aa12.83□□□□□ -0.36
ATM-222ENST00000533733 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.83□□□□□ -0.36
ATM-222ENST00000533733 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.36
ATM-222ENST00000533733 MYO1CO00159 1063 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 MMEP08473 750 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 MDH1P40925 334 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 POLGP54098 1239 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 HMGCS2P54868 508 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 DHX9Q08211 1270 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 PTP4A2Q12974 167 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 MESDQ14696 234 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 EMC2Q15006 297 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 UAP1Q16222 522 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 ARMC9Q7Z3E5 817 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 SAMD7Q7Z3H4 446 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 CCDC60Q8IWA6 550 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 UBLCP1Q8WVY7 318 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 PSPC1Q8WXF1 523 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 MPHOSPH6Q99547 160 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 STMN4Q9H169 189 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 EPN3Q9H201 632 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 DHX33Q9H6R0 707 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 ZNF302Q9NR11 478 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 HOMER3Q9NSC5 361 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 CD2APQ9Y5K6 639 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 PASKQ96RG2 1323 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 TMEM150BA6NC51 233 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 RGS20O76081 388 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 OATP04181 439 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 CORO7P57737 925 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 ZNF844Q08AG5 666 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 GRM1Q13255 1194 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 ZACNQ401N2 412 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 ATP8B4Q8TF62 1192 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 GRK7Q8WTQ7 553 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 KAT5Q92993 513 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 MAGOHBQ96A72 148 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 CEP89Q96ST8 783 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 PORCNQ9H237 461 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 LRRC19Q9H756 370 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 NRBP2Q9NSY0 501 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 ZDHHC18Q9NUE0 388 aa12.82□□□□□ -0.36
ATM-222ENST00000533733 CNOT8Q9UFF9 292 aaKnown RBP12.82□□□□□ -0.36
ATM-222ENST00000533733 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 EGFRP00533 1210 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 UNGP13051 313 aaPredicted RBP12.81□□□□□ -0.36
ATM-222ENST00000533733 LSP1P33241 339 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 PTGIRP43119 386 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 CENPCQ03188 943 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 SLC20A2Q08357 652 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 SURF1Q15526 300 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 TRADDQ15628 312 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 PTPROQ16827 1216 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 LIN9Q5TKA1 542 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 CCDC137Q6PK04 289 aaKnown RBP12.81□□□□□ -0.36
ATM-222ENST00000533733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
ATM-222ENST00000533733 DDX42Q86XP3 938 aaKnown RBP eCLIP12.81□□□□□ -0.36
ATM-222ENST00000533733 PRELID2Q8N945 189 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 ZSWIM2Q8NEG5 633 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 SLC7A3Q8WY07 619 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 FAM167AQ96KS9 214 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 TMEM109Q9BVC6 243 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 CELF4Q9BZC1 486 aaKnown RBP12.81□□□□□ -0.36
ATM-222ENST00000533733 NEUROG2Q9H2A3 272 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 RASSF4Q9H2L5 321 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 MRPL47Q9HD33 250 aaKnown RBP12.81□□□□□ -0.36
ATM-222ENST00000533733 AGO2Q9UKV8 859 aaKnown RBP12.81□□□□□ -0.36
ATM-222ENST00000533733 AFG3L2Q9Y4W6 797 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
ATM-222ENST00000533733 ADGRA3Q8IWK6 1321 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 SPDYE16A6NNV3 312 aaPredicted RBP12.8□□□□□ -0.36
ATM-222ENST00000533733 NDUFAB1O14561 156 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 FSCN2O14926 492 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 C4BPAP04003 597 aaKnown RBP12.8□□□□□ -0.36
ATM-222ENST00000533733 PAEPP09466 180 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
ATM-222ENST00000533733 TGFB3P10600 412 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 COPB2P35606 906 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 ARL2P36404 184 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 COILP38432 576 aaPredicted RBP12.8□□□□□ -0.36
ATM-222ENST00000533733 PPP2R2AP63151 447 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 CAV1Q03135 178 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 DGKZQ13574 1117 aa12.8□□□□□ -0.36
ATM-222ENST00000533733 BYSLQ13895 437 aaKnown RBP12.8□□□□□ -0.36
ATM-222ENST00000533733 NEDD9Q14511 834 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms