RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DSG1Q02413 1049 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 MCM6Q14566 821 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 SPECC1Q5M775 1068 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 ELMSAN1Q6PJG2 1045 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-225ENST00000533704 MPZL3Q6UWV2 235 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 RNF168Q8IYW5 571 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-225ENST00000533704 BICD1Q96G01 975 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 ZBTB45Q96K62 511 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-225ENST00000533704 C17orf75Q9HAS0 396 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 CLIC4Q9Y696 253 aa11.45□□□□□ -0.58
CAPN1-225ENST00000533704 DOCK8Q8NF50 2099 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 MUC6Q6W4X9 2439 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 ZDBF2Q9HCK1 2354 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 C2CD4DB7Z1M9 353 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 K7ELQ4 463 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-225ENST00000533704 MCF2P10911 925 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 LONP1P36776 959 aaKnown RBP11.44□□□□□ -0.58
CAPN1-225ENST00000533704 GRM5P41594 1212 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 ZXDAP98168 799 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 RESTQ13127 1097 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 SEZ6Q53EL9 994 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 RTP2Q5QGT7 225 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 GPR149Q86SP6 731 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 TDRD5Q8NAT2 981 aaKnown RBP11.44□□□□□ -0.58
CAPN1-225ENST00000533704 LRRC15Q8TF66 581 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 SPIRE2Q8WWL2 714 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 EDAQ92838 391 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 ACAP3Q96P50 834 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 REEP2Q9BRK0 252 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 TTPALQ9BTX7 342 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 GOLGA2P5Q9HBQ8 144 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 RXFP1Q9HBX9 757 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAPN1-225ENST00000533704 TOPORSQ9NS56 1045 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-225ENST00000533704 CHST7Q9NS84 486 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 KCND2Q9NZV8 630 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 ZNF318Q5VUA4 2279 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 ANK1P16157 1881 aa11.44□□□□□ -0.58
CAPN1-225ENST00000533704 SMIM28A0A1B0GU29 152 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 CCDC195A0A1B0GUA6 201 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 I3L4J1 428 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 K7ENM7 598 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 SLC26A4O43511 780 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 TBCAO75347 108 aaKnown RBP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 RFPL2O75678 378 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 B3GAT3O94766 335 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 EFEMP2O95967 443 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 MAPTP10636 758 aaKnown RBP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 CLCNKBP51801 687 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 NOLC1Q14978 699 aaKnown RBP eCLIP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 NAB2Q15742 525 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 PSMD5Q16401 504 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 PTPN21Q16825 1174 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 ARSHQ5FYA8 562 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 CCDC149Q6ZUS6 474 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 HFE2Q6ZVN8 426 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 KCTD17Q8N5Z5 321 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 MYCT1Q8N699 235 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 TMEM161BQ8NDZ6 487 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 RAD54LQ92698 747 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 INTS4Q96HW7 963 aaKnown RBP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 EPSTI1Q96J88 318 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 CLIC6Q96NY7 704 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 PPP1R10Q96QC0 940 aaKnown RBP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 PIDD1Q9HB75 910 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 PTPRHQ9HD43 1115 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 BLOC1S4Q9NUP1 217 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 LARSQ9P2J5 1176 aaKnown RBP11.43□□□□□ -0.58
CAPN1-225ENST00000533704 DPP7Q9UHL4 492 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 KCNG1Q9UIX4 513 aa11.43□□□□□ -0.58
CAPN1-225ENST00000533704 TMEM221A6NGB7 291 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 H0YCG3 227 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 M0R296 226 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 TGM5O43548 720 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 ASGR2P07307 311 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 PROZP22891 400 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 CREMQ03060 361 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 SOX4Q06945 474 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 ELAVL2Q12926 359 aaKnown RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 PTPAQ15257 358 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 FOXD4L5Q5VV16 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 DCLRE1AQ6PJP8 1040 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 USP49Q70CQ1 688 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 HAUS6Q7Z4H7 955 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 KREMEN2Q8NCW0 462 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 FOXD4L4Q8WXT5 416 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 SMG7Q92540 1137 aaKnown RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 LARP4BQ92615 738 aaKnown RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 ACSF2Q96CM8 615 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 SNX27Q96L92 541 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 UROC1Q96N76 676 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 NTPCRQ9BSD7 190 aaKnown RBP11.42□□□□□ -0.58
CAPN1-225ENST00000533704 PARVGQ9HBI0 331 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 FNIP2Q9P278 1114 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 CCDC39Q9UFE4 941 aa11.42□□□□□ -0.58
CAPN1-225ENST00000533704 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms