RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 CMASQ8NFW8 434 aaPredicted RBP24.41■■□□□ 1.5
BEST1-207ENST00000533521 LRRC15Q8TF66 581 aa24.41■■□□□ 1.5
BEST1-207ENST00000533521 REEP2Q9BRK0 252 aa24.41■■□□□ 1.5
BEST1-207ENST00000533521 PARVGQ9HBI0 331 aa24.41■■□□□ 1.5
BEST1-207ENST00000533521 SLC38A7Q9NVC3 462 aa24.41■■□□□ 1.5
BEST1-207ENST00000533521 CCDC39Q9UFE4 941 aa24.41■■□□□ 1.5
BEST1-207ENST00000533521 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.41■■□□□ 1.5
BEST1-207ENST00000533521 TEX28O15482 410 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 KCNE1P15382 129 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 NASPP49321 788 aaPredicted RBP24.4■■□□□ 1.5
BEST1-207ENST00000533521 MCL1Q07820 350 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 PDXDC1Q6P996 788 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 C15orf39Q6ZRI6 1047 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 HAUS6Q7Z4H7 955 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 RASSF8Q8NHQ8 419 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 ACAP3Q96P50 834 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 TCHPQ9BT92 498 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 NR2E1Q9Y466 385 aa24.4■■□□□ 1.5
BEST1-207ENST00000533521 MYH15Q9Y2K3 1946 aa24.39■■□□□ 1.5
BEST1-207ENST00000533521 SMIM28A0A1B0GU29 152 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 F8W810 466 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 PIGRP01833 764 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 TXLNAP40222 546 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 MCM6Q14566 821 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 KYAT1Q16773 422 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 ATAT1Q5SQI0 421 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 DCLRE1AQ6PJP8 1040 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 HSCBQ8IWL3 235 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 DDX27Q96GQ7 796 aaKnown RBP24.39■■□□□ 1.49
BEST1-207ENST00000533521 EPSTI1Q96J88 318 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 USP28Q96RU2 1077 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 PAAF1Q9BRP4 392 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 ST6GALNAC4Q9H4F1 302 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 PLEKHA4Q9H4M7 779 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 C11orf16Q9NQ32 467 aa24.39■■□□□ 1.49
BEST1-207ENST00000533521 NPHP3-ACAD11A0A0J9YXS1 232 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 CASTOR2A6NHX0 329 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 CLDN3O15551 220 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 FAM13AO94988 1023 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 MARCKSP29966 332 aaPredicted RBP24.38■■□□□ 1.49
BEST1-207ENST00000533521 NOLC1Q14978 699 aaKnown RBP eCLIP24.38■■□□□ 1.49
BEST1-207ENST00000533521 FAM173BQ6P4H8 233 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 GPR149Q86SP6 731 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 CEP120Q8N960 986 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 KRI1Q8N9T8 703 aaKnown RBP24.38■■□□□ 1.49
BEST1-207ENST00000533521 PIK3R5Q8WYR1 880 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 SNX27Q96L92 541 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 LRFN3Q9BTN0 628 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 CXCL16Q9H2A7 254 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 CNTN3Q9P232 1028 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 USTQ9Y2C2 406 aa24.38■■□□□ 1.49
BEST1-207ENST00000533521 PRR33A8MZF0 331 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 C2CD2LO14523 706 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 TRAK2O60296 914 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 KIF4AO95239 1232 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 GLUD1P00367 558 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 UPP1Q16831 310 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 RARS2Q5T160 578 aaKnown RBP24.37■■□□□ 1.49
BEST1-207ENST00000533521 LILRA6Q6PI73 481 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 USP49Q70CQ1 688 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 MYCT1Q8N699 235 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 TSPAN18Q96SJ8 248 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 TTPALQ9BTX7 342 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 PLEKHA5Q9HAU0 1116 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 TBX20Q9UMR3 447 aa24.37■■□□□ 1.49
BEST1-207ENST00000533521 PLXNA3P51805 1871 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 PDCD11Q14690 1871 aaKnown RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 DENND4AQ7Z401 1863 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 TRAPPC3O43617 180 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 RPL9P32969 192 aaKnown RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 RRAGBQ5VZM2 374 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 CCDC73Q6ZRK6 1079 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 RIN2Q8WYP3 895 aaPredicted RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 RPGRIP1Q96KN7 1286 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 ZNF396Q96N95 335 aaPredicted RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 POMKQ9H5K3 350 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 SEL1LQ9UBV2 794 aa24.36■■□□□ 1.49
BEST1-207ENST00000533521 ARIH1Q9Y4X5 557 aaPredicted RBP24.36■■□□□ 1.49
BEST1-207ENST00000533521 TBCAO75347 108 aaKnown RBP24.35■■□□□ 1.49
BEST1-207ENST00000533521 KRT18P05783 430 aaKnown RBP24.35■■□□□ 1.49
BEST1-207ENST00000533521 GTF2BQ00403 316 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 CACNB1Q02641 598 aaPredicted RBP24.35■■□□□ 1.49
BEST1-207ENST00000533521 FAM171A1Q5VUB5 890 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 ZBTB33Q86T24 672 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 LINC00301Q8NCQ3 95 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 EDAQ92838 391 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 ZBTB45Q96K62 511 aaPredicted RBP24.35■■□□□ 1.49
BEST1-207ENST00000533521 FIZ1Q96SL8 496 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 APOL5Q9BWW9 433 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 FOXD4L1Q9NU39 408 aa24.35■■□□□ 1.49
BEST1-207ENST00000533521 VWA8A3KMH1 1905 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 PPP6R2O75170 966 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 B3GAT3O94766 335 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 YEATS4O95619 227 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 CLTAP09496 248 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 FGFR3P22607 806 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 DHX8Q14562 1220 aaKnown RBP24.34■■□□□ 1.49
BEST1-207ENST00000533521 RTP2Q5QGT7 225 aa24.34■■□□□ 1.49
BEST1-207ENST00000533521 PLCD3Q8N3E9 789 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms