RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GPC3P51654 580 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 COPS2P61201 443 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 OTUD6AQ7L8S5 288 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 MGARPQ8TDB4 240 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 HELQQ8TDG4 1101 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 SEMA4DQ92854 862 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 L3MBTL3Q96JM7 780 aaPredicted RBP17.76■□□□□ 0.43
CTSB-228ENST00000533455 DEFB129Q9H1M3 183 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 ACP6Q9NPH0 428 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 ADGRA3Q8IWK6 1321 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 ECE1P42892 770 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 RARRES1P49788 294 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 KCNJ2P63252 427 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 NUGGCQ68CJ6 796 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 NSMFQ6X4W1 530 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 HAUS6Q7Z4H7 955 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 IWS1Q96ST2 819 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 TIPINQ9BVW5 301 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 DCLK3Q9C098 648 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 GRIN3BO60391 1043 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 LYPLA2O95372 231 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 ALDH5A1P51649 535 aaPredicted RBP17.75■□□□□ 0.43
CTSB-228ENST00000533455 ITGA8P53708 1063 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 NCKAP1LP55160 1127 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 MAP2K1Q02750 393 aaPredicted RBP17.75■□□□□ 0.43
CTSB-228ENST00000533455 CRYMQ14894 314 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 CLEC16AQ2KHT3 1053 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 KRT39Q6A163 491 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 MAEAQ7L5Y9 396 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 MIEF2Q96C03 454 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 TBC1D31Q96DN5 1066 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 STAMBPL1Q96FJ0 436 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 TRAIPQ9BWF2 469 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 AVENQ9NQS1 362 aaPredicted RBP17.75■□□□□ 0.43
CTSB-228ENST00000533455 CHST7Q9NS84 486 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 NINJ2Q9NZG7 142 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 ACTL7BQ9Y614 415 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 ZHX2Q9Y6X8 837 aa17.75■□□□□ 0.43
CTSB-228ENST00000533455 IGF2BP3O00425 579 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■■□□□ 11.8
CTSB-228ENST00000533455 PLA2G6O60733 806 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 GAS8O95995 478 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 POTEJP0CG39 1038 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 ACCSLQ4AC99 568 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 NIPA1Q7RTP0 329 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 RELL1Q8IUW5 271 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 CHURC1Q8WUH1 139 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 KIFAP3Q92845 792 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 IFT74Q96LB3 600 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 MAGEB18Q96M61 343 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 NT5C1BQ96P26 610 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 TMEM8AQ9HCN3 771 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 ARHGEF3Q9NR81 526 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 CTNNAL1Q9UBT7 734 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 SUFUQ9UMX1 484 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 BRAFP15056 766 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 ATF2P15336 505 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
CTSB-228ENST00000533455 SLC1A1P43005 524 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 SLC8A3P57103 927 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 CENPCQ03188 943 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 SNX1Q13596 522 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 MPP2Q14168 576 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 SLC27A3Q5K4L6 730 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 RNF43Q68DV7 783 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 ASRGL1Q7L266 308 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 MAB21L3Q8N8X9 362 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 ANKRD42Q8N9B4 389 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 SLC17A8Q8NDX2 589 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 AGAP11Q8TF27 550 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 TMX4Q9H1E5 349 aaPredicted RBP17.74■□□□□ 0.43
CTSB-228ENST00000533455 KCNK9Q9NPC2 374 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 C15orf41Q9Y2V0 281 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 NEU2Q9Y3R4 380 aa17.74■□□□□ 0.43
CTSB-228ENST00000533455 DDX39AO00148 427 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 DHX15O43143 795 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 THAP12O43422 761 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 ITGB5P18084 799 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 MAPK4P31152 587 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 PDE6BP35913 854 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 SKIV2L2P42285 1042 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 CLNS1AP54105 237 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 CCDC15Q0P6D6 951 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 PTP4A2Q12974 167 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 ACVR2BQ13705 512 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 SNRNP35Q16560 246 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 KYNUQ16719 465 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 ARHGEF18Q6ZSZ5 1173 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 ACER1Q8TDN7 264 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 KLHL29Q96CT2 875 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 RSRC1Q96IZ7 334 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 EURLQ9NYK6 297 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 HERC5Q9UII4 1024 aaKnown RBP17.73■□□□□ 0.43
CTSB-228ENST00000533455 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 ANAPC5Q9UJX4 755 aa17.73■□□□□ 0.43
CTSB-228ENST00000533455 GBP2P32456 591 aaPredicted RBP17.72■□□□□ 0.43
CTSB-228ENST00000533455 HSD17B4P51659 736 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms