RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 SNX24Q9Y343 169 aa16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 COL11A1P12107 1806 aaPredicted RBP16.46■□□□□ 0.23
CACNA1E-208ENST00000533229 LTBP3Q9NS15 1303 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 HMGB1P1B2RPK0 211 aaPredicted RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 EXTL3O43909 919 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PHF2O75151 1096 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 STAM2O75886 525 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 ATG7O95352 703 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 GLRA2P23416 452 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 CCT5P48643 541 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 LIG4P49917 911 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 POLGP54098 1239 aaPredicted RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 CLDN10P78369 228 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PPARDQ03181 441 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 ZBTB41Q5SVQ8 909 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 USP37Q86T82 979 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PSPC1Q8WXF1 523 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 FMO2Q99518 471 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 KIAA0391O15091 583 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 SPOPO43791 374 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 EDN1P05305 212 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 MYZAPP0CAP1 466 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 DHX34Q14147 1143 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 LLGL1Q15334 1064 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 STXBP2Q15833 593 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PPP2R5EQ16537 467 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 C2CD6Q53TS8 623 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 TDRD10Q5VZ19 366 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 SCARA3Q6AZY7 606 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 SEPT14Q6ZU15 432 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 MAGOHBQ96A72 148 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 CEP89Q96ST8 783 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 CNOT8Q9UFF9 292 aaKnown RBP16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 ATP8A1Q9Y2Q0 1164 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 STYXL1Q9Y6J8 313 aa16.45■□□□□ 0.22
CACNA1E-208ENST00000533229 PHIPQ8WWQ0 1821 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 FAM187AA6NFU0 413 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 ZEB2O60315 1214 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 PPFIA2O75334 1257 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 TNNI1P19237 187 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 HPDP32754 393 aaPredicted RBP16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 PLTPP55058 493 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 PSMD6Q15008 389 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 ZACNQ401N2 412 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 TREML2Q5T2D2 321 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 LLGL2Q6P1M3 1020 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 FBXO25Q8TCJ0 367 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 CPA5Q8WXQ8 436 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 MTFR1LQ9H019 292 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 PORCNQ9H237 461 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 EPB41L4BQ9H329 900 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 DHX33Q9H6R0 707 aaKnown RBP16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 UVRAGQ9P2Y5 699 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 MYPNQ86TC9 1320 aa16.44■□□□□ 0.22
CACNA1E-208ENST00000533229 VNN1O95497 513 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 OATP04181 439 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 CFHP08603 1231 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 RARAP10276 462 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 CHRNA3P32297 505 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 CLUL1Q15846 466 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 SLC13A5Q86YT5 568 aaPredicted RBP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 MORC4Q8TE76 937 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 CNKSR2Q8WXI2 1034 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 PCYT2Q99447 389 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 PCYOX1Q9UHG3 505 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 DOCK5Q9H7D0 1870 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 GOLGA6L10A6NI86 522 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 DCDC2CA8MYV0 355 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 ZC3H11AO75152 810 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 HLA-DRAP01903 254 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 ICAM3P32942 547 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 LSP1P33241 339 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 SEL1L2Q5TEA6 688 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 ANKRD35Q8N283 1001 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 FNBP1Q96RU3 617 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 TARS2Q9BW92 718 aaKnown RBP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 BRCA1P38398 1863 aaKnown RBP16.43■□□□□ 0.22
CACNA1E-208ENST00000533229 LRRIQ4A6NIV6 560 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 ARL2P36404 184 aa16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 RPL21P46778 160 aaKnown RBP16.42■□□□□ 0.22
CACNA1E-208ENST00000533229 KCNJ1P48048 391 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms