RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 NAB2Q15742 525 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 USP41Q3LFD5 358 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 FOXD4L5Q5VV16 416 aaPredicted RBP24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 HAUS6Q7Z4H7 955 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 RNF135Q8IUD6 432 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 FOXD4L4Q8WXT5 416 aaPredicted RBP24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 BICD1Q96G01 975 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 FBXL18Q96ME1 805 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 CHST7Q9NS84 486 aa24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 SF3B1O75533 1304 aaKnown RBP eCLIP24.03■■□□□ 1.44
NDUFS3-210ENST00000533105 LOC730098B7Z3J9 87 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 TEX28O15482 410 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 DCXO43602 365 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 TBCAO75347 108 aaKnown RBP24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 ADH1AP07327 375 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 SP100P23497 879 aaPredicted RBP24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 MATR3P43243 847 aaKnown RBP eCLIP24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 NCKAP1LP55160 1127 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 SLC39A14Q15043 492 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 RIN2Q8WYP3 895 aaPredicted RBP24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 ACAP3Q96P50 834 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 PPP1R10Q96QC0 940 aaKnown RBP24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 PARVGQ9HBI0 331 aa24.02■■□□□ 1.44
NDUFS3-210ENST00000533105 K7ENM7 598 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 ABLIM1O14639 778 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 TOM1L1O75674 476 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 MYBP10242 640 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 TMEM31Q5JXX7 168 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 RRAGBQ5VZM2 374 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 TMC5Q6UXY8 1006 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 CEP57Q86XR8 500 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 KRI1Q8N9T8 703 aaKnown RBP24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 SPRYD3Q8NCJ5 442 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 MUTYHQ9UIF7 546 aa24.01■■□□□ 1.43
NDUFS3-210ENST00000533105 SMIM28A0A1B0GU29 152 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 TRAK2O60296 914 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 BRD1O95696 1058 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 NOLC1Q14978 699 aaKnown RBP eCLIP24■■□□□ 1.43
NDUFS3-210ENST00000533105 STK38Q15208 465 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 SEZ6Q53EL9 994 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 FAM171A1Q5VUB5 890 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 ZPBP2Q6X784 338 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 GLYCTKQ8IVS8 523 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 RIPOR3Q96MK2 946 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 NECTIN4Q96NY8 510 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 SFXN1Q9H9B4 322 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 GOLGA2P5Q9HBQ8 144 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 RXFP1Q9HBX9 757 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 TSHZ2Q9NRE2 1034 aa24■■□□□ 1.43
NDUFS3-210ENST00000533105 CLDN3O15551 220 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 B3GAT3O94766 335 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 GLUD1P00367 558 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 RPL17P18621 184 aaKnown RBP23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 MTHFRP42898 656 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 CLCNKBP51801 687 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 ZNF131P52739 623 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 RTP2Q5QGT7 225 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 ATAT1Q5SQI0 421 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 ALKAL1Q6UXT8 129 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 PALB2Q86YC2 1186 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 SNX27Q96L92 541 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 ZNF396Q96N95 335 aaPredicted RBP23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 LRFN3Q9BTN0 628 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 PANK2Q9BZ23 570 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 POMKQ9H5K3 350 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 MAN1C1Q9NR34 630 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 TFIP11Q9UBB9 837 aaKnown RBP23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 STK17AQ9UEE5 414 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 TBX20Q9UMR3 447 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 MYH11P35749 1972 aa23.99■■□□□ 1.43
NDUFS3-210ENST00000533105 SPATA31D3P0C874 917 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 NASPP49321 788 aaPredicted RBP23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 LIG4P49917 911 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 XKR4Q5GH76 650 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 PRSS55Q6UWB4 352 aaPredicted RBP23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 SPATA31D4Q6ZUB0 917 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 DYMQ7RTS9 669 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 FEZF2Q8TBJ5 459 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 ZMAT2Q96NC0 199 aaKnown RBP23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 TTPALQ9BTX7 342 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 C11orf16Q9NQ32 467 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 SLC38A7Q9NVC3 462 aa23.98■■□□□ 1.43
NDUFS3-210ENST00000533105 HNRNPDLO14979 420 aaKnown RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 GPR37L1O60883 481 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 COL9A1P20849 921 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 IGFBP6P24592 240 aaPredicted RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 NMT1P30419 496 aaKnown RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 CREMQ03060 361 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 MCL1Q07820 350 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 ELAVL2Q12926 359 aaKnown RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 FOXD4L6Q3SYB3 417 aaPredicted RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 DCLRE1AQ6PJP8 1040 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 FOXD4L3Q6VB84 417 aaPredicted RBP23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 SV2BQ7L1I2 683 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 LINC00301Q8NCQ3 95 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 UROC1Q96N76 676 aa23.97■■□□□ 1.43
NDUFS3-210ENST00000533105 SOX4Q06945 474 aaPredicted RBP23.96■■□□□ 1.43
NDUFS3-210ENST00000533105 UPP1Q16831 310 aa23.96■■□□□ 1.43
NDUFS3-210ENST00000533105 HERC4Q5GLZ8 1057 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms