RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CETN3O15182 167 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 NR3C1P04150 777 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 ALDH2P05091 517 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 ADRB2P07550 413 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CXCL8P10145 99 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 KCNE1P15382 129 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CCNE1P24864 410 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 TAP1Q03518 808 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 LRRC63Q05C16 580 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 PPP2R3AQ06190 1150 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 NFIL3Q16649 462 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 EDRF1Q3B7T1 1238 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 XKR4Q5GH76 650 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CRELD2Q6UXH1 353 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 LRRC55Q6ZSA7 311 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 GSTCDQ8NEC7 633 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 NELFBQ8WX92 580 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 SNX27Q96L92 541 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 FBXL18Q96ME1 805 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 SAMD11Q96NU1 681 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 ASB7Q9H672 318 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 RBAKQ9NYW8 714 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 RWDD3Q9Y3V2 267 aa12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 MRPL42Q9Y6G3 142 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-211ENST00000533012 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 PTGESO14684 152 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 DDHD2O94830 711 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 IL18RAPO95256 599 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 LAG3P18627 525 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 NR2F2P24468 414 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 FKBP3Q00688 224 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 GRIK3Q13003 919 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 PAK1Q13153 545 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 SURF1Q15526 300 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 SNRNP35Q16560 246 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZCWPW2Q504Y3 356 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CEP135Q66GS9 1140 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZNF280BQ86YH2 543 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CBWD2Q8IUF1 395 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 ZSWIM2Q8NEG5 633 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CLP1Q92989 425 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 TGS1Q96RS0 853 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CWH43Q9H720 699 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 NRDE2Q9H7Z3 1164 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 ANO10Q9NW15 660 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 CNTN3Q9P232 1028 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-211ENST00000533012 TTC3P53804 2025 aa12.21□□□□□ -0.46
TRAPPC4-211ENST00000533012 MICAL3Q7RTP6 2002 aa12.21□□□□□ -0.46
TRAPPC4-211ENST00000533012 XPOTO43592 962 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 PSMC2P35998 433 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 BMPR1AP36894 532 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 PMS1P54277 932 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 STX17P56962 302 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 ERVK-21P61565 698 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 SPAG1Q07617 926 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 GSE1Q14687 1217 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 GLRA4Q5JXX5 417 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 BRSK2Q8IWQ3 736 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZMAT2Q96NC0 199 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZNF558Q96NG5 402 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 PPP1R10Q96QC0 940 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 TMEM175Q9BSA9 504 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 CXCL16Q9H2A7 254 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZNF576Q9H609 170 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 RWDD2AQ9UIY3 292 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 CTNND2Q9UQB3 1225 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 FAN1Q9Y2M0 1017 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 DERAQ9Y315 318 aa12.2□□□□□ -0.46
TRAPPC4-211ENST00000533012 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 TRIM49BA6NDI0 452 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 SOX1O00570 391 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 MAPK13O15264 365 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 MEFVO15553 781 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZC3H11AO75152 810 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 FGFR1OPO95684 399 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 RB1P06400 928 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 GALTP07902 379 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 CYP3A5P20815 502 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 OR1G1P47890 313 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 BCAR1P56945 870 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 TUSC3Q13454 348 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 TMEM132DQ14C87 1099 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 ZBTB6Q15916 424 aa12.19□□□□□ -0.46
TRAPPC4-211ENST00000533012 STX1AQ16623 288 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms