RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NAB2Q15742 525 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 ELMSAN1Q6PJG2 1045 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 HSCBQ8IWL3 235 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 GPR65Q8IYL9 337 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 CEP120Q8N960 986 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 RIN2Q8WYP3 895 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 LARP4BQ92615 738 aaKnown RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 ZBTB45Q96K62 511 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 B3GALT6Q96L58 329 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 ZHX3Q9H4I2 956 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 PARVGQ9HBI0 331 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 MUTYHQ9UIF7 546 aa18.88■□□□□ 0.61
PHRF1-204ENST00000532550 FBXO2Q9UK22 296 aaPredicted RBP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 SF3B1O75533 1304 aaKnown RBP eCLIP18.88■□□□□ 0.61
PHRF1-204ENST00000532550 SMIM28A0A1B0GU29 152 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 FAM86C2PA6NEL3 165 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 TOM1L1O75674 476 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
PHRF1-204ENST00000532550 SCP2P22307 547 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 PROZP22891 400 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 MATR3P43243 847 aaKnown RBP eCLIP18.87■□□□□ 0.61
PHRF1-204ENST00000532550 NCKAP1LP55160 1127 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 CREMQ03060 361 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 ELAVL2Q12926 359 aaKnown RBP18.87■□□□□ 0.61
PHRF1-204ENST00000532550 SLC39A14Q15043 492 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
PHRF1-204ENST00000532550 GLRA4Q5JXX5 417 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 DCLRE1AQ6PJP8 1040 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 TMC5Q6UXY8 1006 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 ZPBP2Q6X784 338 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 USP49Q70CQ1 688 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 HAUS6Q7Z4H7 955 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 LRRC15Q8TF66 581 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 HASPINQ8TF76 798 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 BICD1Q96G01 975 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 CLIC6Q96NY7 704 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 PPP1R10Q96QC0 940 aaKnown RBP18.87■□□□□ 0.61
PHRF1-204ENST00000532550 SFXN1Q9H9B4 322 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 NR2E1Q9Y466 385 aa18.87■□□□□ 0.61
PHRF1-204ENST00000532550 CLDN3O15551 220 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 KIF4AO95239 1232 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 BRD1O95696 1058 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 GLUD1P00367 558 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 WEE2P0C1S8 567 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 FAM171A1Q5VUB5 890 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 RRAGBQ5VZM2 374 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 ALKAL1Q6UXT8 129 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 CEP57Q86XR8 500 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 PALB2Q86YC2 1186 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 UROC1Q96N76 676 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 USP28Q96RU2 1077 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 TTPALQ9BTX7 342 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 POMKQ9H5K3 350 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 SLC38A7Q9NVC3 462 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 ANKFY1Q9P2R3 1169 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 CDH22Q9UJ99 828 aa18.86■□□□□ 0.61
PHRF1-204ENST00000532550 ABLIM1O14639 778 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 TRAK2O60296 914 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 TBCAO75347 108 aaKnown RBP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 B3GAT3O94766 335 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 PDIA4P13667 645 aaKnown RBP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 SP100P23497 879 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 XKR4Q5GH76 650 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 GPR149Q86SP6 731 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 DDX27Q96GQ7 796 aaKnown RBP18.85■□□□□ 0.61
PHRF1-204ENST00000532550 C11orf16Q9NQ32 467 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 MAN1C1Q9NR34 630 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
PHRF1-204ENST00000532550 CITO14578 2027 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 K7ENM7 598 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 TRAPPC3O43617 180 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 C1RP00736 705 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 ABCD1P33897 745 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 CLCNKBP51801 687 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 ZNF131P52739 623 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 STK38Q15208 465 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 RTP2Q5QGT7 225 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 PDXDC1Q6P996 788 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 GLYCTKQ8IVS8 523 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 HDAC7Q8WUI4 952 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 ZNF396Q96N95 335 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-204ENST00000532550 TBX20Q9UMR3 447 aa18.84■□□□□ 0.61
PHRF1-204ENST00000532550 MORC2Q9Y6X9 1032 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-204ENST00000532550 MYO10Q9HD67 2058 aa18.83■□□□□ 0.61
PHRF1-204ENST00000532550 PRR33A8MZF0 331 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 TMEM189-UBE2V1I3L0A0 370 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 SPATA31D3P0C874 917 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 MYBP10242 640 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 KCNE1P15382 129 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 RPL17P18621 184 aaKnown RBP18.83■□□□□ 0.6
PHRF1-204ENST00000532550 LIG4P49917 911 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 MCL1Q07820 350 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 UPP1Q16831 310 aa18.83■□□□□ 0.6
PHRF1-204ENST00000532550 SEZ6Q53EL9 994 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms