RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RPA1P27694 616 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 NCOA4Q13772 614 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CENPUQ71F23 418 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 PCGF5Q86SE9 256 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 SLITRK1Q96PX8 696 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 UBQLN1Q9UMX0 589 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 IRF6O14896 467 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 MSH4O15457 936 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CABYRO75952 493 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 TAF6P49848 677 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CLCN3P51790 818 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 GPC5P78333 572 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 MIPOL1Q8TD10 442 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 SYTL5Q8TDW5 730 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 CFAP36Q96G28 342 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 FMO2Q99518 471 aa11.99□□□□□ -0.49
PTPRK-221ENST00000532331 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.99□□□□□ -0.49
PTPRK-221ENST00000532331 EXOC1LA0A1B0GW35 172 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 EVI5O60447 810 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SEC31AO94979 1220 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 BAG2O95816 211 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 HMBSP08397 361 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 TMC7Q7Z402 723 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 FRMD5Q7Z6J6 570 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 HVCN1Q96D96 273 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 HAUS8Q9BT25 410 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MSRAQ9UJ68 235 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MID2Q9UJV3 735 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 H3BRJ5 948 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 DHX38Q92620 1227 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 LRGUKQ96M69 825 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 CAMKK2Q96RR4 588 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 ABHD10Q9NUJ1 306 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 KLK14Q9P0G3 267 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 FGGP02679 453 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 ADCY1Q08828 1119 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 CUL1Q13616 776 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MFSD10Q14728 455 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 DRAP1Q14919 205 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 TMEM132BQ14DG7 1078 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SNRNP35Q16560 246 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 CEP120Q8N960 986 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 DEPDC1BQ8WUY9 529 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 POLR3CQ9BUI4 534 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 FAM205CA6NFA0 338 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 VTNP04004 478 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 EIF3BP55884 814 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MAPRE1Q15691 268 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 IQSEC1Q6DN90 963 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 C15orf52Q6ZUT6 534 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SDCCAG3Q96C92 435 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 FAM163AQ96GL9 167 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 PDCD2LQ9BRP1 358 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 CNOT10Q9H9A5 744 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 C17orf75Q9HAS0 396 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 CCDC151A5D8V7 595 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 LRRC53A6NM62 1247 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 RASGRF2O14827 1237 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SLC16A3O15427 465 aaKnown RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 ZNF235Q14590 738 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 TTC19Q6DKK2 380 aaPredicted RBP11.98□□□□□ -0.49
PTPRK-221ENST00000532331 TTC13Q8NBP0 860 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 WNK4Q96J92 1243 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 SLC4A7Q9Y6M7 1214 aa11.98□□□□□ -0.49
PTPRK-221ENST00000532331 MED1Q15648 1581 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PODXLO00592 558 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TTC4O95801 387 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 IGFBP4P22692 258 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 ALDH5A1P51649 535 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 NR1H3Q13133 447 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 KCNB1Q14721 858 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PTGISQ16647 500 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 EFHBQ8N7U6 833 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 MED15Q96RN5 788 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 KLC2Q9H0B6 622 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PCSK1NQ9UHG2 260 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 FAN1Q9Y2M0 1017 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 HEY1Q9Y5J3 304 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TTI1O43156 1089 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 ZRANB2O95218 330 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 MYBP10242 640 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 MYBL1P10243 752 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 CYP2C19P33261 490 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 BTG3Q14201 252 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TDRD10Q5VZ19 366 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 Q9H521 79 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 FAM8A1Q9UBU6 413 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms