RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-215ENST00000531885 SLC7A14Q8TBB6 771 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 ZSCAN32Q9NX65 697 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
CMTM1-215ENST00000531885 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
CMTM1-215ENST00000531885 NCOR2Q9Y618 2525 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 POTEMA6NI47 508 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 ZBTB39O15060 712 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 B4GALT5O43286 388 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 KIF4AO95239 1232 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 GLRA2P23416 452 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 KRT2P35908 639 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 NTHL1P78549 312 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 LMNB2Q03252 620 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 MAPK6Q16659 721 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 KXD1Q9BQD3 176 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 CLSTN3Q9BQT9 956 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
CMTM1-215ENST00000531885 SMG5Q9UPR3 1016 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 MRPS23Q9Y3D9 190 aaKnown RBP12.77□□□□□ -0.37
CMTM1-215ENST00000531885 CACNA1BQ00975 2339 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 NEMFO60524 1076 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 LRRN2O75325 713 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
CMTM1-215ENST00000531885 ELF1P32519 619 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 OR1D2P34982 312 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 RARRES1P49788 294 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 NRLP54845 237 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
CMTM1-215ENST00000531885 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 TPRG1Q6ZUI0 275 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 MAEAQ7L5Y9 396 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 ITFG1Q8TB96 612 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
CMTM1-215ENST00000531885 FAM126AQ9BYI3 521 aaPredicted RBP12.76□□□□□ -0.37
CMTM1-215ENST00000531885 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
CMTM1-215ENST00000531885 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 GDE1Q9NZC3 331 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
CMTM1-215ENST00000531885 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 ECI2O75521 394 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 RECQL4O94761 1208 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 B3GAT3O94766 335 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 LRG1P02750 347 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 RPS9P46781 194 aaKnown RBP12.75□□□□□ -0.37
CMTM1-215ENST00000531885 RAB33AQ14088 237 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 TRIM29Q14134 588 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 NPAS3Q8IXF0 933 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 MAML2Q8IZL2 1156 aaPredicted RBP12.75□□□□□ -0.37
CMTM1-215ENST00000531885 UROC1Q96N76 676 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 HSD17B14Q9BPX1 270 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 EPC1Q9H2F5 836 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CMTM1-215ENST00000531885 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 PRKCBP05771 671 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 LIG1P18858 919 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 CD72P21854 359 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 TXKP42681 527 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 SCRN1Q12765 414 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 PPP2R5AQ15172 486 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 ING5Q8WYH8 240 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 DNASE1L2Q92874 299 aa12.74□□□□□ -0.37
CMTM1-215ENST00000531885 IFT74Q96LB3 600 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms