RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PIK3R5Q8WYR1 880 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 FGF13Q92913 245 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 FZD8Q9H461 694 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 PDZD7Q9H5P4 517 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 SNTG2Q9NY99 539 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 USP20Q9Y2K6 914 aa19.16■□□□□ 0.66
PKP3-208ENST00000531857 C8AP07357 584 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 HNRNPA1P09651 372 aaKnown RBP eCLIP19.15■□□□□ 0.66
PKP3-208ENST00000531857 SPATA31C1P0DKV0 1188 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 IGFBP6P24592 240 aaPredicted RBP19.15■□□□□ 0.66
PKP3-208ENST00000531857 PPM1LQ5SGD2 360 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 LIN9Q5TKA1 542 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 CDCA2Q69YH5 1023 aaPredicted RBP19.15■□□□□ 0.66
PKP3-208ENST00000531857 DCLK2Q8N568 766 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 NECAB1Q8N987 351 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 ITFG1Q8TB96 612 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 BSNDQ8WZ55 320 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 PRIMPOLQ96LW4 560 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 MTMR9Q96QG7 549 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 PRMT7Q9NVM4 692 aaPredicted RBP19.15■□□□□ 0.66
PKP3-208ENST00000531857 POLIQ9UNA4 740 aa19.15■□□□□ 0.66
PKP3-208ENST00000531857 MTF2Q9Y483 593 aaPredicted RBP19.15■□□□□ 0.66
PKP3-208ENST00000531857 DNAH14Q0VDD8 3507 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 BTBD18B2RXH4 712 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 NEMFO60524 1076 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 RECQL4O94761 1208 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 EDN1P05305 212 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 THP07101 528 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 XRCC6P12956 609 aaKnown RBP eCLIP19.14■□□□□ 0.65
PKP3-208ENST00000531857 FAM187BQ17R55 369 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 NOSTRINQ8IVI9 506 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 WASF1Q92558 559 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 TMEM60Q9H2L4 133 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 HCFC1R1Q9NWW0 138 aa19.14■□□□□ 0.65
PKP3-208ENST00000531857 MED19A0JLT2 244 aaPredicted RBP19.13■□□□□ 0.65
PKP3-208ENST00000531857 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 FOSBP53539 338 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 ZC3H14Q6PJT7 736 aaKnown RBP19.13■□□□□ 0.65
PKP3-208ENST00000531857 CATSPER3Q86XQ3 398 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 SLC7A14Q8TBB6 771 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 SHDQ96IW2 340 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 HINFPQ9BQA5 517 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 KXD1Q9BQD3 176 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 BRMS1Q9HCU9 246 aa19.13■□□□□ 0.65
PKP3-208ENST00000531857 CEP250Q9BV73 2442 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 KANSL1LA0AUZ9 987 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 N4BP3O15049 544 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 MED24O75448 989 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 LARGE1O95461 756 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 HOXA9P31269 272 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 OR1D2P34982 312 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 PRPF4BQ13523 1007 aaKnown RBP19.12■□□□□ 0.65
PKP3-208ENST00000531857 MLF2Q15773 248 aaPredicted RBP19.12■□□□□ 0.65
PKP3-208ENST00000531857 SLC44A4Q53GD3 710 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 AXDND1Q5T1B0 1012 aaPredicted RBP19.12■□□□□ 0.65
PKP3-208ENST00000531857 EEF1DP3Q658K8 133 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 RSPO2Q6UXX9 243 aaPredicted RBP19.12■□□□□ 0.65
PKP3-208ENST00000531857 MTSS1LQ765P7 747 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 ZBTB8OSQ8IWT0 167 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 SUMF1Q8NBK3 374 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 MCPH1Q8NEM0 835 aa19.12■□□□□ 0.65
PKP3-208ENST00000531857 DDX23Q9BUQ8 820 aaKnown RBP19.12■□□□□ 0.65
PKP3-208ENST00000531857 XYLBO75191 536 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 LIG1P18858 919 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 CD72P21854 359 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 RAB33AQ14088 237 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 TMEM132AQ24JP5 1023 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 DIS3L2Q8IYB7 885 aaKnown RBP19.11■□□□□ 0.65
PKP3-208ENST00000531857 ING5Q8WYH8 240 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 RUBCNQ92622 972 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 CCDC113Q9H0I3 377 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 SPATA6Q9NWH7 488 aaPredicted RBP19.11■□□□□ 0.65
PKP3-208ENST00000531857 DNMT3BQ9UBC3 853 aaKnown RBP19.11■□□□□ 0.65
PKP3-208ENST00000531857 GDAQ9Y2T3 454 aa19.11■□□□□ 0.65
PKP3-208ENST00000531857 PRKCBP05771 671 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 FGFR3P22607 806 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 ELAVL2Q12926 359 aaKnown RBP19.1■□□□□ 0.65
PKP3-208ENST00000531857 UBXN2BQ14CS0 331 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 MAPK6Q16659 721 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 ME3Q16798 604 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 POTEHQ6S545 545 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 CD300LGQ6UXG3 332 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.1■□□□□ 0.65
PKP3-208ENST00000531857 DGLUCYQ7Z3D6 616 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 NPAS3Q8IXF0 933 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 NSUN7Q8NE18 718 aaKnown RBP19.1■□□□□ 0.65
PKP3-208ENST00000531857 POLD4Q9HCU8 107 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 TUFT1Q9NNX1 390 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 CITO14578 2027 aa19.1■□□□□ 0.65
PKP3-208ENST00000531857 FAM170BA6NMN3 283 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 ACKR2O00590 384 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 PRKCQQ04759 706 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 PABPC1LQ4VXU2 614 aaKnown RBP19.09■□□□□ 0.65
PKP3-208ENST00000531857 GLRA4Q5JXX5 417 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 PADI6Q6TGC4 694 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 GTF3C6Q969F1 213 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 ADPGKQ9BRR6 497 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 KIFC3Q9BVG8 833 aa19.09■□□□□ 0.65
PKP3-208ENST00000531857 BCO2Q9BYV7 579 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms