RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 MAEAQ7L5Y9 396 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 POTEDQ86YR6 584 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 BLIDQ8IZY5 108 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 OXER1Q8TDS5 423 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 RSPH1Q8WYR4 309 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 CLDN23Q96B33 292 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 TTPALQ9BTX7 342 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 TRIM6Q9C030 488 aaPredicted RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 POLD4Q9HCU8 107 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 GPRC5CQ9NQ84 441 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 PRMT8Q9NR22 394 aaPredicted RBP9.97□□□□□ -0.81
USF1-210ENST00000531842 STK39Q9UEW8 545 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 FAM208BQ5VWN6 2430 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 WDFY3Q8IZQ1 3526 aa9.97□□□□□ -0.81
USF1-210ENST00000531842 ANK1P16157 1881 aa9.96□□□□□ -0.81
USF1-210ENST00000531842 P4HBP07237 508 aaKnown RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 IFNAR1P17181 557 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GJA1P17302 382 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GLRA2P23416 452 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 CCR2P41597 374 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 RCAN1P53805 252 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 LMNB2Q03252 620 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GRIK3Q13003 919 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 STK3Q13188 491 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 PPP2R5CQ13362 524 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GAS6Q14393 721 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 NAB2Q15742 525 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 TSGA10IPQ3SY00 556 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 PABPC1LQ4VXU2 614 aaKnown RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GLRA4Q5JXX5 417 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 HEATR6Q6AI08 1181 aaKnown RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 MTSS1LQ765P7 747 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 NOSTRINQ8IVI9 506 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 TPH2Q8IWU9 490 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 PIK3R5Q8WYR1 880 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 ZSWIM3Q96MP5 696 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 MTRQ99707 1265 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 RTKNQ9BST9 563 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 GOLGA2P5Q9HBQ8 144 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 KCNMB3Q9NPA1 279 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 UBN1Q9NPG3 1134 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.96□□□□□ -0.82
USF1-210ENST00000531842 RXFP3Q9NSD7 469 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 RBM12Q9NTZ6 932 aaKnown RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 SNTG2Q9NY99 539 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 DPP7Q9UHL4 492 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 GIT1Q9Y2X7 761 aa9.96□□□□□ -0.82
USF1-210ENST00000531842 MRPS23Q9Y3D9 190 aaKnown RBP9.96□□□□□ -0.82
USF1-210ENST00000531842 CCDC196A0A1B0GTZ2 297 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 PRR5-ARHGAP8B1AHC4 643 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 CHURC1-FNTBB4DL54 471 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 WNT7AO00755 349 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 HRO43593 1189 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 NR1I2O75469 434 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 RHOP08100 348 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 HNRNPA1P09651 372 aaKnown RBP eCLIP9.95□□□□□ -0.82
USF1-210ENST00000531842 LIG1P18858 919 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 RPS6KB1P23443 525 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 TKTP29401 623 aaKnown RBP9.95□□□□□ -0.82
USF1-210ENST00000531842 RFC5P40937 340 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 VIPR2P41587 438 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 BRCC3P46736 316 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 SOX9P48436 509 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 FNTBP49356 437 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 ARHGAP8P85298 464 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 SPIRE1Q08AE8 756 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 KRT32Q14532 448 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 FAM78AQ5JUQ0 283 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 EEF1DP3Q658K8 133 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 CD300LGQ6UXG3 332 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 HS6ST3Q8IZP7 471 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 C3orf58Q8NDZ4 430 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 TTC8Q8TAM2 541 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 PIGOQ8TEQ8 1089 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 JPH2Q9BR39 696 aaPredicted RBP9.95□□□□□ -0.82
USF1-210ENST00000531842 OSBPL6Q9BZF3 934 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 POLR3FQ9H1D9 316 aaPredicted RBP9.95□□□□□ -0.82
USF1-210ENST00000531842 SMOC1Q9H4F8 434 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 GMEB2Q9UKD1 530 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 CDY1Q9Y6F8 540 aa9.95□□□□□ -0.82
USF1-210ENST00000531842 SF3B1O75533 1304 aaKnown RBP eCLIP9.95□□□□□ -0.826e-7■■■■■ 71.8
USF1-210ENST00000531842 CITO14578 2027 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SLC30A4O14863 429 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 TBX3O15119 743 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 USO1O60763 962 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 XYLBO75191 536 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 RECQL4O94761 1208 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 SLITRK3O94933 977 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 HMGB1P09429 215 aaKnown RBP9.94□□□□□ -0.82
USF1-210ENST00000531842 ARL2P36404 184 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 ARPP19P56211 112 aa9.94□□□□□ -0.82
USF1-210ENST00000531842 ADCY1Q08828 1119 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms