RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 TUFT1Q9NNX1 390 aa23.21■■□□□ 1.31
FDFT1-220ENST00000531733 MYH15Q9Y2K3 1946 aa23.21■■□□□ 1.31
FDFT1-220ENST00000531733 NOTCH4Q99466 2003 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 N4BP3O15049 544 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 CCL16O15467 120 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 PRKCBP05771 671 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 THP07101 528 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 C8AP07357 584 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 RFX1P22670 979 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 PRPF4BQ13523 1007 aaKnown RBP23.2■■□□□ 1.3
FDFT1-220ENST00000531733 PADI6Q6TGC4 694 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 CD300LGQ6UXG3 332 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 SLC2A4RGQ9NR83 387 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 GDAQ9Y2T3 454 aa23.2■■□□□ 1.3
FDFT1-220ENST00000531733 EP300Q09472 2414 aaPredicted RBP23.19■■□□□ 1.3
FDFT1-220ENST00000531733 GPC5P78333 572 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 ECM1Q16610 540 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 PHLDB3Q6NSJ2 640 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 DCLRE1AQ6PJP8 1040 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 RSPO2Q6UXX9 243 aaPredicted RBP23.19■■□□□ 1.3
FDFT1-220ENST00000531733 ITFG1Q8TB96 612 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 NACC1Q96RE7 527 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 POLR3CQ9BUI4 534 aaPredicted RBP23.19■■□□□ 1.3
FDFT1-220ENST00000531733 HCFC1R1Q9NWW0 138 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 CDH7Q9ULB5 785 aa23.19■■□□□ 1.3
FDFT1-220ENST00000531733 ACKR2O00590 384 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 CYP11B2P19099 503 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 ZNF174Q15697 407 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 MAPK6Q16659 721 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 TMEM132AQ24JP5 1023 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 GLRA4Q5JXX5 417 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 PPM1LQ5SGD2 360 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 SIT1Q9Y3P8 196 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 TRIP11Q15643 1979 aa23.18■■□□□ 1.3
FDFT1-220ENST00000531733 TRIM29Q14134 588 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 NT5DC1Q5TFE4 455 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 LIN9Q5TKA1 542 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 SLC7A14Q8TBB6 771 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 FGF13Q92913 245 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 C2orf40Q9H1Z8 148 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 GOLGA2P5Q9HBQ8 144 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 POLIQ9UNA4 740 aa23.17■■□□□ 1.3
FDFT1-220ENST00000531733 HNRNPA1P09651 372 aaKnown RBP eCLIP23.16■■□□□ 1.3
FDFT1-220ENST00000531733 RPA1P27694 616 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 OR1D2P34982 312 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 NAMPTP43490 491 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 NEK4P51957 841 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 POTEHQ6S545 545 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 C3orf58Q8NDZ4 430 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 PJA1Q8NG27 643 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 DEPTORQ8TB45 409 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 PPP1R10Q96QC0 940 aaKnown RBP23.16■■□□□ 1.3
FDFT1-220ENST00000531733 CACNA1IQ9P0X4 2223 aa23.16■■□□□ 1.3
FDFT1-220ENST00000531733 DNAH14Q0VDD8 3507 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 ARHGEF35A5YM69 484 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 I3L4J1 428 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 OR52Z1P0C646 297 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 SP9P0CG40 484 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 FGFR3P22607 806 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 ID4P47928 161 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 CLCNKBP51801 687 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 STARD6P59095 220 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 SNW1Q13573 536 aaKnown RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 AXDND1Q5T1B0 1012 aaPredicted RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 MAML2Q8IZL2 1156 aaPredicted RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 KCNG4Q8TDN1 519 aa23.15■■□□□ 1.3
FDFT1-220ENST00000531733 DNMT3BQ9UBC3 853 aaKnown RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 MTF2Q9Y483 593 aaPredicted RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 ZFP37Q9Y6Q3 630 aaPredicted RBP23.15■■□□□ 1.3
FDFT1-220ENST00000531733 LMNAP02545 664 aaKnown RBP23.14■■□□□ 1.29
FDFT1-220ENST00000531733 TKTP29401 623 aaKnown RBP23.14■■□□□ 1.29
FDFT1-220ENST00000531733 HOXA9P31269 272 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 RAB33AQ14088 237 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 C1orf210Q8IVY1 113 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 CEP120Q8N960 986 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 ING5Q8WYH8 240 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 KXD1Q9BQD3 176 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 ADPGKQ9BRR6 497 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 MTRRQ9UBK8 725 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 CDY1Q9Y6F8 540 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 FANCMQ8IYD8 2048 aa23.14■■□□□ 1.29
FDFT1-220ENST00000531733 BRCC3P46736 316 aa23.13■■□□□ 1.29
FDFT1-220ENST00000531733 SOX4Q06945 474 aaPredicted RBP23.13■■□□□ 1.29
FDFT1-220ENST00000531733 ELAVL2Q12926 359 aaKnown RBP23.13■■□□□ 1.29
FDFT1-220ENST00000531733 NBR1Q14596 966 aa23.13■■□□□ 1.29
FDFT1-220ENST00000531733 ATF7IP2Q5U623 682 aa23.13■■□□□ 1.29
FDFT1-220ENST00000531733 DDX27Q96GQ7 796 aaKnown RBP23.13■■□□□ 1.29
FDFT1-220ENST00000531733 MIA3Q5JRA6 1907 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 TMEM189-UBE2V1I3L0A0 370 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 B3GAT3O94766 335 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 FOXK2Q01167 660 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 UPP1Q16831 310 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 DCAF4L1Q3SXM0 396 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 NPAS3Q8IXF0 933 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 C4orf32Q8N8J7 132 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 ERMNQ8TAM6 284 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 BHMT2Q9H2M3 363 aa23.12■■□□□ 1.29
FDFT1-220ENST00000531733 CACNA1AO00555 2505 aa23.11■■□□□ 1.29
FDFT1-220ENST00000531733 XYLBO75191 536 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms