RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CCDC113Q9H0I3 377 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 TBC1D17Q9HA65 648 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 NUMBLQ9Y6R0 609 aa20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 PDCD11Q14690 1871 aaKnown RBP20.35■□□□□ 0.85
SSSCA1-206ENST00000531405 ANHXE9PGG2 379 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 THP07101 528 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 FSHRP23945 695 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 ZNF174Q15697 407 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 MAPK6Q16659 721 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 PIK3R5Q8WYR1 880 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 NXPE3Q969Y0 559 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 RPP25Q9BUL9 199 aaKnown RBP20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 C2orf40Q9H1Z8 148 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 GDAQ9Y2T3 454 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 PATJQ8NI35 1801 aa20.34■□□□□ 0.85
SSSCA1-206ENST00000531405 ARHGEF35A5YM69 484 aa20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 CYP11B2P19099 503 aa20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 IGFBP6P24592 240 aaPredicted RBP20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 SPECC1Q5M775 1068 aa20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 ADSSL1Q8N142 457 aa20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 DEPTORQ8TB45 409 aa20.33■□□□□ 0.85
SSSCA1-206ENST00000531405 ACKR2O00590 384 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 CCL16O15467 120 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 C8AP07357 584 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 DCNP07585 359 aaKnown RBP20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 OR52Z1P0C646 297 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 RPA1P27694 616 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 NAMPTP43490 491 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 SAFBQ15424 915 aaKnown RBP eCLIP20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 GLRA4Q5JXX5 417 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 PPM1LQ5SGD2 360 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 LIN9Q5TKA1 542 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 ERMNQ8TAM6 284 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 FGF14Q92915 247 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 ADPGKQ9BRR6 497 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 ARHGEF3Q9NR81 526 aa20.32■□□□□ 0.84
SSSCA1-206ENST00000531405 ECM1Q16610 540 aa20.31■□□□□ 0.84
SSSCA1-206ENST00000531405 PARM1Q6UWI2 310 aa20.31■□□□□ 0.84
SSSCA1-206ENST00000531405 POLIQ9UNA4 740 aa20.31■□□□□ 0.84
SSSCA1-206ENST00000531405 HNRNPA1P09651 372 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 NT5DC1Q5TFE4 455 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 CCDC83Q8IWF9 413 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 ITFG1Q8TB96 612 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 SLC7A14Q8TBB6 771 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 C8orf76Q96K31 380 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 FOXQ1Q9C009 403 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 SLC2A4RGQ9NR83 387 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 CDH7Q9ULB5 785 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 R4GN57 208 aa20.3■□□□□ 0.84
SSSCA1-206ENST00000531405 OR1D2P34982 312 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 GPC5P78333 572 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 ELAVL2Q12926 359 aaKnown RBP20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 NBR1Q14596 966 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 PPP2R5AQ15172 486 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 DCAF4L1Q3SXM0 396 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 TTC38Q5R3I4 469 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 AXDND1Q5T1B0 1012 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 PHLDB3Q6NSJ2 640 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 RSPO2Q6UXX9 243 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 FGF13Q92913 245 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 GOLGA2P5Q9HBQ8 144 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 HCFC1R1Q9NWW0 138 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 DLGAP2Q9P1A6 1054 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 SIT1Q9Y3P8 196 aa20.29■□□□□ 0.84
SSSCA1-206ENST00000531405 I3L4J1 428 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 LRRN2O75325 713 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 SEC24BO95487 1268 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 NEFLP07196 543 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 CCT6AP40227 531 aaKnown RBP20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 CLCNKBP51801 687 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 ATF7IP2Q5U623 682 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 IFT74Q96LB3 600 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 PPP1R10Q96QC0 940 aaKnown RBP20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 ZFP37Q9Y6Q3 630 aaPredicted RBP20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 OTOGLQ3ZCN5 2332 aa20.28■□□□□ 0.84
SSSCA1-206ENST00000531405 XYLBO75191 536 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 B3GAT3O94766 335 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 GLULP15104 373 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 FGFR3P22607 806 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 TKTP29401 623 aaKnown RBP20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 HOXA9P31269 272 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 RAB33AQ14088 237 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 HAUS3Q68CZ6 603 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 PDXDC1Q6P996 788 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 CD300LGQ6UXG3 332 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 CEP120Q8N960 986 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 C3orf58Q8NDZ4 430 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 PJA1Q8NG27 643 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 KCNG4Q8TDN1 519 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 FOXP1Q9H334 677 aaPredicted RBP20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 MTRRQ9UBK8 725 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 KIAA1024Q9UPX6 916 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 CDY1Q9Y6F8 540 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 DNAH14Q0VDD8 3507 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 CACNA1AO00555 2505 aa20.27■□□□□ 0.84
SSSCA1-206ENST00000531405 TMEM189-UBE2V1I3L0A0 370 aa20.26■□□□□ 0.83
SSSCA1-206ENST00000531405 BRCC3P46736 316 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms