RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 CASTOR2A6NHX0 329 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 CLDN3O15551 220 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 TBX10O75333 385 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 MYBP10242 640 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 CTSAP10619 480 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 IDEP14735 1019 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 CMA1P23946 247 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 TNFSF9P41273 254 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 SOX4Q06945 474 aaPredicted RBP17.76■□□□□ 0.43
RELA-216ENST00000531238 TUSC3Q13454 348 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 LEXMQ3ZCV2 418 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 ACAP3Q96P50 834 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
RELA-216ENST00000531238 CUEDC2Q9H467 287 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 MRPL44Q9H9J2 332 aaKnown RBP17.76■□□□□ 0.43
RELA-216ENST00000531238 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 SERTAD1Q9UHV2 236 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
RELA-216ENST00000531238 A0A0B4J269 797 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 NCK2O43639 380 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 CLASP2O75122 1294 aaKnown RBP17.75■□□□□ 0.43
RELA-216ENST00000531238 GAP43P17677 238 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 LIG4P49917 911 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 SMC1AQ14683 1233 aaKnown RBP17.75■□□□□ 0.43
RELA-216ENST00000531238 NOLC1Q14978 699 aaKnown RBP eCLIP17.75■□□□□ 0.43
RELA-216ENST00000531238 CNNM4Q6P4Q7 775 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 BICD1Q96G01 975 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 MSLNLQ96KJ4 702 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 B3GALT6Q96L58 329 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 SNX27Q96L92 541 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 COLEC11Q9BWP8 271 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 BLZF1Q9H2G9 400 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 GOLGA2P5Q9HBQ8 144 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 SEL1LQ9UBV2 794 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 IRAK3Q9Y616 596 aa17.75■□□□□ 0.43
RELA-216ENST00000531238 FAM237AA0A1B0GTK4 181 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 CARNS1A5YM72 827 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 ACTN4O43707 911 aaKnown RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 SOD2P04179 222 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 KCNE1P15382 129 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 PFKFB1P16118 471 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 SCP2P22307 547 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 ADSSP30520 456 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 COASYQ13057 564 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 CUL4BQ13620 913 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 PTPN14Q15678 1187 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 CLUL1Q15846 466 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 KIAA0319Q5VV43 1072 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 APBB1IPQ7Z5R6 666 aaPredicted RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 HASPINQ8TF76 798 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 C18orf25Q96B23 403 aaPredicted RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 NECAB3Q96P71 396 aaPredicted RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 OLFML3Q9NRN5 406 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 CHST7Q9NS84 486 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 CNTN3Q9P232 1028 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 BARX2Q9UMQ3 279 aaPredicted RBP17.74■□□□□ 0.43
RELA-216ENST00000531238 STYXL1Q9Y6J8 313 aa17.74■□□□□ 0.43
RELA-216ENST00000531238 TDRD15B5MCY1 1934 aaKnown RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 GRXCR2A6NFK2 248 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 HNRNPDLO14979 420 aaKnown RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 PRPF6O94906 941 aaKnown RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 KIF4AO95239 1232 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 HOXD13P35453 343 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 MATR3P43243 847 aaKnown RBP eCLIP17.73■□□□□ 0.43
RELA-216ENST00000531238 AFMP43652 599 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 CLCNKBP51801 687 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 YARSP54577 528 aaKnown RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 NUCB2P80303 420 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 SPAG1Q07617 926 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 AAK1Q2M2I8 961 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 L1TD1Q5T7N2 865 aaKnown RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 LLGL2Q6P1M3 1020 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 TMEM184AQ6ZMB5 413 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 ZSWIM2Q8NEG5 633 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 PPP2R3CQ969Q6 453 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 PAGE5Q96GU1 130 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 CDCA3Q99618 268 aaPredicted RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 HERC2P3Q9BVR0 1158 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 SCAND2PQ9GZW5 306 aaPredicted RBP17.73■□□□□ 0.43
RELA-216ENST00000531238 GOLPH3LQ9H4A5 285 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 ADAM28Q9UKQ2 775 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 ATP6V1DQ9Y5K8 247 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 TRIP11Q15643 1979 aa17.73■□□□□ 0.43
RELA-216ENST00000531238 TCHHQ07283 1943 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 TCF20Q9UGU0 1960 aaKnown RBP17.72■□□□□ 0.43
RELA-216ENST00000531238 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
RELA-216ENST00000531238 TTC26A0AVF1 554 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 LACTBL1A8MY62 500 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 DLL1O00548 723 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 OGTO15294 1046 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 NR1I2O75469 434 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 TADA2AO75478 443 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 GCNT3O95395 438 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 ADRB2P07550 413 aa17.72■□□□□ 0.43
RELA-216ENST00000531238 CLTAP09496 248 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms