RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 LOC730098B7Z3J9 87 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 C2CD2LO14523 706 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 PTGESO14684 152 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 GPR37L1O60883 481 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 PPP6R2O75170 966 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 TOM1L1O75674 476 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 FAM13AO94988 1023 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 EFEMP2O95967 443 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 CNPP09543 421 aaKnown RBP12.03□□□□□ -0.48
CAPN1-221ENST00000531068 PLCG1P19174 1290 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 MARCKSP29966 332 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-221ENST00000531068 DSG1Q02413 1049 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 KYAT1Q16773 422 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 ZNF568Q3ZCX4 644 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 FUT10Q6P4F1 479 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 DCLRE1AQ6PJP8 1040 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 ZPBP2Q6X784 338 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 TAS1R1Q7RTX1 841 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 RNF168Q8IYW5 571 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-221ENST00000531068 MYCT1Q8N699 235 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 RAD54LQ92698 747 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 UROC1Q96N76 676 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 RXFP1Q9HBX9 757 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 SLC38A7Q9NVC3 462 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
CAPN1-221ENST00000531068 SF3B1O75533 1304 aaKnown RBP eCLIP12.03□□□□□ -0.48
CAPN1-221ENST00000531068 SPTLC2O15270 562 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 TEX28O15482 410 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 CLDN3O15551 220 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 TRAPPC3O43617 180 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 TBCAO75347 108 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 EDN1P05305 212 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 MAPTP10636 758 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 EPCAMP16422 314 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 PROZP22891 400 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 CLCN4P51793 760 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 CEBPZQ03701 1054 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 GRIN1Q05586 938 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 MCM6Q14566 821 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 KARSQ15046 597 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 ADALQ6DHV7 355 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 PDXDC1Q6P996 788 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 MPZL3Q6UWV2 235 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 CYP26C1Q6V0L0 522 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 HAUS6Q7Z4H7 955 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 ZBTB33Q86T24 672 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 RNF135Q8IUD6 432 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 KCNG4Q8TDN1 519 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 HDAC7Q8WUI4 952 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 KCNN1Q92952 543 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 SYAP1Q96A49 352 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 APOL5Q9BWW9 433 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 GPR62Q9BZJ7 368 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 CDT1Q9H211 546 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 SFXN1Q9H9B4 322 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 PARVGQ9HBI0 331 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 FNIP2Q9P278 1114 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 FBXO2Q9UK22 296 aaPredicted RBP12.02□□□□□ -0.49
CAPN1-221ENST00000531068 REV3LO60673 3130 aa12.02□□□□□ -0.49
CAPN1-221ENST00000531068 NPHP3-ACAD11A0A0J9YXS1 232 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 CASTOR2A6NHX0 329 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 B3GAT3O94766 335 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 GLUD1P00367 558 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 ZNF131P52739 623 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 XKR4Q5GH76 650 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 HERC4Q5GLZ8 1057 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 RARS2Q5T160 578 aaKnown RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 ALKAL1Q6UXT8 129 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 RIN2Q8WYP3 895 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 BICD1Q96G01 975 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 PPP1R10Q96QC0 940 aaKnown RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 REEP2Q9BRK0 252 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 TTPALQ9BTX7 342 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 ZHX3Q9H4I2 956 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 PLEKHA4Q9H4M7 779 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 BLOC1S4Q9NUP1 217 aa12.01□□□□□ -0.49
CAPN1-221ENST00000531068 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.01□□□□□ -0.49
CAPN1-221ENST00000531068 TMEM189-UBE2V1I3L0A0 370 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 CLTAP09496 248 aa12□□□□□ -0.49
CAPN1-221ENST00000531068 KCNE1P15382 129 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms