RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 GPR161Q8N6U8 529 aaKnown RBP17.79■□□□□ 0.44
COL16A1-216ENST00000529928 SLC7A14Q8TBB6 771 aa17.79■□□□□ 0.44
COL16A1-216ENST00000529928 ATRIPQ8WXE1 791 aa17.79■□□□□ 0.44
COL16A1-216ENST00000529928 TM6SF1Q9BZW5 370 aa17.79■□□□□ 0.44
COL16A1-216ENST00000529928 POLR3FQ9H1D9 316 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-216ENST00000529928 PRMT7Q9NVM4 692 aaPredicted RBP17.79■□□□□ 0.44
COL16A1-216ENST00000529928 WDR87Q6ZQQ6 2873 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 FAM170BA6NMN3 283 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 THP07101 528 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 CSTF1Q05048 431 aaKnown RBP17.78■□□□□ 0.44
COL16A1-216ENST00000529928 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
COL16A1-216ENST00000529928 RTL10Q7L3V2 364 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 ITFG1Q8TB96 612 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 SECISBP2LQ93073 1101 aaKnown RBP17.78■□□□□ 0.44
COL16A1-216ENST00000529928 NELL2Q99435 816 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 KXD1Q9BQD3 176 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 LTB4R2Q9NPC1 389 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 KCNH3Q9ULD8 1083 aa17.78■□□□□ 0.44
COL16A1-216ENST00000529928 PATJQ8NI35 1801 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 PTGESO14684 152 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 N4BP3O15049 544 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 USO1O60763 962 aaKnown RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 SCRN1Q12765 414 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 RAB33AQ14088 237 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 FAM187BQ17R55 369 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 PABPC1LQ4VXU2 614 aaKnown RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 EARS2Q5JPH6 523 aaKnown RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 NPAS3Q8IXF0 933 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 ZBTB44Q8NCP5 570 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 TTC12Q9H892 705 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 GJB4Q9NTQ9 266 aa17.77■□□□□ 0.44
COL16A1-216ENST00000529928 MTF2Q9Y483 593 aaPredicted RBP17.77■□□□□ 0.44
COL16A1-216ENST00000529928 DOCK6Q96HP0 2047 aa17.77■□□□□ 0.43
COL16A1-216ENST00000529928 FRYLO94915 3013 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 NCAM2O15394 837 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 ADAM12O43184 909 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 XRCC6P12956 609 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL16A1-216ENST00000529928 OR1D2P34982 312 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 CALCRLQ16602 461 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 CDCA2Q69YH5 1023 aaPredicted RBP17.76■□□□□ 0.43
COL16A1-216ENST00000529928 ZBTB8OSQ8IWT0 167 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 ADPGKQ9BRR6 497 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 FZD8Q9H461 694 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 HCFC1R1Q9NWW0 138 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 ZSCAN32Q9NX65 697 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 SNTG2Q9NY99 539 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 COL4A3Q01955 1670 aa17.76■□□□□ 0.43
COL16A1-216ENST00000529928 CEP250Q9BV73 2442 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 FAM205CA6NFA0 338 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 ECI2O75521 394 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 RECQL4O94761 1208 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 CD72P21854 359 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 KRT2P35908 639 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 RPS9P46781 194 aaKnown RBP17.75■□□□□ 0.43
COL16A1-216ENST00000529928 NR5A1Q13285 461 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 NAB2Q15742 525 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 TMEM132AQ24JP5 1023 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 TPRG1Q6ZUI0 275 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 WASF1Q92558 559 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 CLDN23Q96B33 292 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 C2orf40Q9H1Z8 148 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 EPC1Q9H2F5 836 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 PDZD7Q9H5P4 517 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 PPP4R2Q9NY27 417 aa17.75■□□□□ 0.43
COL16A1-216ENST00000529928 DNMT3BQ9UBC3 853 aaKnown RBP17.75■□□□□ 0.43
COL16A1-216ENST00000529928 SMG5Q9UPR3 1016 aaKnown RBP17.75■□□□□ 0.43
COL16A1-216ENST00000529928 MRPS17Q9Y2R5 130 aaKnown RBP17.75■□□□□ 0.43
COL16A1-216ENST00000529928 MRPS23Q9Y3D9 190 aaKnown RBP17.75■□□□□ 0.43
COL16A1-216ENST00000529928 LILRB5O75023 590 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 FGFR3P22607 806 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 TARSP26639 723 aaKnown RBP17.74■□□□□ 0.43
COL16A1-216ENST00000529928 TXKP42681 527 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 PRPF4BQ13523 1007 aaKnown RBP17.74■□□□□ 0.43
COL16A1-216ENST00000529928 MAPK6Q16659 721 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 ING5Q8WYH8 240 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 NELL1Q92832 810 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 GDE1Q9NZC3 331 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 MTRRQ9UBK8 725 aa17.74■□□□□ 0.43
COL16A1-216ENST00000529928 DAXXQ9UER7 740 aaPredicted RBP17.74■□□□□ 0.43
COL16A1-216ENST00000529928 PRR5-ARHGAP8B1AHC4 643 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 TMEM189-UBE2V1I3L0A0 370 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 NEMFO60524 1076 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 ATP2B1P20020 1258 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 RBM25P49756 843 aaKnown RBP17.73■□□□□ 0.43
COL16A1-216ENST00000529928 ARHGAP8P85298 464 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 LMNB2Q03252 620 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 ZNF852Q6ZMS4 543 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 TNFRSF25Q93038 417 aa17.73■□□□□ 0.43
COL16A1-216ENST00000529928 FAM126AQ9BYI3 521 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-216ENST00000529928 ORC3Q9UBD5 711 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms