RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 LILRB5O75023 590 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PSMD10O75832 226 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ERLIN2O94905 339 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 EFEMP2O95967 443 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SDHBP21912 280 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 HOXC13P31276 330 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SFNP31947 248 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CIITAP33076 1130 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PRKCQQ04759 706 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 DSC1Q08554 894 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 DMWDQ09019 674 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 LAMTOR4Q0VGL1 99 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 COL9A2Q14055 689 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 NECTIN1Q15223 517 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CCDC6Q16204 474 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 USP41Q3LFD5 358 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PPM1LQ5SGD2 360 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PPP1R15BQ5SWA1 713 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 LILRA6Q6PI73 481 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CYP26C1Q6V0L0 522 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SKAP1Q86WV1 359 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 NPAS3Q8IXF0 933 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 RNF149Q8NC42 400 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLC7A14Q8TBB6 771 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TBCKQ8TEA7 893 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PSPC1Q8WXF1 523 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 RSPH1Q8WYR4 309 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MCRS1Q96EZ8 462 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CEP170P1Q96L14 293 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 RIT2Q99578 217 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ESYT1Q9BSJ8 1104 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TMUB1Q9BVT8 246 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 COLEC11Q9BWP8 271 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 RHOBTB2Q9BYZ6 727 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ZMYND12Q9H0C1 365 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CHST7Q9NS84 486 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 KANSL3Q9P2N6 904 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 STK39Q9UEW8 545 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 FBXW11Q9UKB1 542 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ADAM28Q9UKQ2 775 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SSX2IPQ9Y2D8 614 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PATJQ8NI35 1801 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ITPR1Q14643 2758 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PKD1L2Q7Z442 2459 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 DMXL2Q8TDJ6 3036 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 F5P12259 2224 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SDK1Q7Z5N4 2213 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ESYT2A0FGR8 921 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 INO80B-WBP1J3KQ70 363 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 ZBTB39O15060 712 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLC37A4O43826 429 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 NR1I2O75469 434 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TADA2AO75478 443 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 KIF4AO95239 1232 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 NPTXRO95502 500 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CEBPBP17676 345 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 IGFBP6P24592 240 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 FGD1P98174 961 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CDC42EP1Q00587 391 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 EXOSC10Q01780 885 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 EMC2Q15006 297 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PSMD5Q16401 504 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLC5A9Q2M3M2 681 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PABPC1LQ4VXU2 614 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 FAM171A1Q5VUB5 890 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 HEATR6Q6AI08 1181 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TANGO2Q6ICL3 276 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 GPR161Q8N6U8 529 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CCDC12Q8WUD4 166 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 HDAC7Q8WUI4 952 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLC7A3Q8WY07 619 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MBOAT7Q96N66 472 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CLSTN3Q9BQT9 956 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLC26A6Q9BXS9 759 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 TRIM6Q9C030 488 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 CXCL16Q9H2A7 254 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SLKQ9H2G2 1235 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 NCOA5Q9HCD5 579 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PRMT8Q9NR22 394 aaPredicted RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 DNMT3BQ9UBC3 853 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 PARP2Q9UGN5 583 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 RAB23Q9ULC3 237 aa3.93□□□□□ -1.78
PTPRC-213ENST00000529828 MRPS23Q9Y3D9 190 aaKnown RBP3.93□□□□□ -1.78
PTPRC-213ENST00000529828 SHISA7A6NL88 538 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CHURC1-FNTBB4DL54 471 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SLC30A4O14863 429 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TBC1D4O60343 1298 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 DTNBO60941 627 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 XYLBO75191 536 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 TDGF1P13385 188 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 GNA11P29992 359 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 FNTBP49356 437 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 NLRP5P59047 1200 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 PSMC5P62195 406 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 CCT2P78371 535 aaKnown RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 IRX6P78412 446 aaPredicted RBP3.92□□□□□ -1.78
PTPRC-213ENST00000529828 PFKPQ01813 784 aa3.92□□□□□ -1.78
PTPRC-213ENST00000529828 SATB1Q01826 763 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms