RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 SLC16A4O15374 487 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 TADA2AO75478 443 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 PIGRP01833 764 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPB1-206ENST00000529210 KCNE1P15382 129 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 LIG1P18858 919 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 PLCG1P19174 1290 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 ABCD1P33897 745 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 MCL1Q07820 350 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 ZRSR1Q15695 479 aaKnown RBP13.22□□□□□ -0.29
COPB1-206ENST00000529210 ZNF568Q3ZCX4 644 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 ATAT1Q5SQI0 421 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 LILRA6Q6PI73 481 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 BMP8AQ7Z5Y6 402 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 GPR149Q86SP6 731 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 PIK3R5Q8WYR1 880 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 LARP4BQ92615 738 aaKnown RBP13.22□□□□□ -0.29
COPB1-206ENST00000529210 RAD54LQ92698 747 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 CCDC94Q9BW85 323 aaPredicted RBP13.22□□□□□ -0.29
COPB1-206ENST00000529210 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 CNTN3Q9P232 1028 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 FBXO2Q9UK22 296 aaPredicted RBP13.22□□□□□ -0.29
COPB1-206ENST00000529210 GDAQ9Y2T3 454 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 CLIC4Q9Y696 253 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 PDCD11Q14690 1871 aaKnown RBP13.22□□□□□ -0.29
COPB1-206ENST00000529210 TECTAO75443 2155 aa13.22□□□□□ -0.29
COPB1-206ENST00000529210 C2orf16Q68DN1 1984 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 SMIM28A0A1B0GU29 152 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 CASTOR2A6NHX0 329 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 KIF4AO95239 1232 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 GLUD1P00367 558 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 DDIT3P35638 169 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.29
COPB1-206ENST00000529210 STRN3Q13033 797 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 UPP1Q16831 310 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 RARS2Q5T160 578 aaKnown RBP13.21□□□□□ -0.29
COPB1-206ENST00000529210 PDXDC1Q6P996 788 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 ELMSAN1Q6PJG2 1045 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 CEP120Q8N960 986 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 SNX27Q96L92 541 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 FIZ1Q96SL8 496 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 PLIN2Q99541 437 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 PARVGQ9HBI0 331 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 SLC38A7Q9NVC3 462 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 STK17AQ9UEE5 414 aa13.21□□□□□ -0.29
COPB1-206ENST00000529210 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.21□□□□□ -0.29
COPB1-206ENST00000529210 MYH15Q9Y2K3 1946 aa13.21□□□□□ -0.3
COPB1-206ENST00000529210 C2CD2LO14523 706 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 STX6O43752 255 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 NASPP49321 788 aaPredicted RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 ZXDAP98168 799 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 NOLC1Q14978 699 aaKnown RBP eCLIP13.2□□□□□ -0.3
COPB1-206ENST00000529210 SLC39A14Q15043 492 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 KARSQ15046 597 aaKnown RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 KYAT1Q16773 422 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 RTP2Q5QGT7 225 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 ZDHHC14Q8IZN3 488 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 C12orf76Q8N812 135 aaPredicted RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
COPB1-206ENST00000529210 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 APOL5Q9BWW9 433 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 ZDHHC7Q9NXF8 308 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 CDH22Q9UJ99 828 aa13.2□□□□□ -0.3
COPB1-206ENST00000529210 NPHP3-ACAD11A0A0J9YXS1 232 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 CLDN3O15551 220 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 MEFVO15553 781 aaPredicted RBP13.19□□□□□ -0.3
COPB1-206ENST00000529210 ADRB2P07550 413 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 FGFR3P22607 806 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 GTF2BQ00403 316 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 MCM6Q14566 821 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 PTPN21Q16825 1174 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 RTL10Q7L3V2 364 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
COPB1-206ENST00000529210 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 ZBTB45Q96K62 511 aaPredicted RBP13.19□□□□□ -0.3
COPB1-206ENST00000529210 ZMAT2Q96NC0 199 aaKnown RBP13.19□□□□□ -0.3
COPB1-206ENST00000529210 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 CLSTN3Q9BQT9 956 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 TCHPQ9BT92 498 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 PLEKHA5Q9HAU0 1116 aa13.19□□□□□ -0.3
COPB1-206ENST00000529210 CACNG4Q9UBN1 327 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms