RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CPNE8Q86YQ8 564 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 CCDC197Q8NCU1 140 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 FBXL13Q8NEE6 735 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 AGBL3Q8NEM8 1001 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 TAS1R2Q8TE23 839 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 ZNF653Q96CK0 615 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 SERPINB12Q96P63 405 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 PLVAPQ9BX97 442 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 MOV10L1Q9BXT6 1211 aaKnown RBP8.97□□□□□ -0.97
CSTF3-208ENST00000528865 GLIS2Q9BZE0 524 aaPredicted RBP8.97□□□□□ -0.97
CSTF3-208ENST00000528865 MAF1Q9H063 256 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 SLC40A1Q9NP59 571 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 GPRC5CQ9NQ84 441 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 KLC4Q9NSK0 619 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 KCNG1Q9UIX4 513 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 NEU2Q9Y3R4 380 aa8.97□□□□□ -0.97
CSTF3-208ENST00000528865 H0YHG0 523 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 RASGRF2O14827 1237 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CHUKO15111 745 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 SPOPO43791 374 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 SORBS3O60504 671 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 DKC1O60832 514 aaKnown RBP eCLIP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 ATP9AO75110 1047 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 ECEL1O95672 775 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CYP1A1P04798 512 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 ABCD1P33897 745 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 PDE6CP51160 858 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 GSCP56915 257 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 BPIFB4P59827 614 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CENPCQ03188 943 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CNGA2Q16280 664 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 XKR9Q5GH70 373 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 RNF207Q6ZRF8 634 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 RPAINQ86UA6 219 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 EXOC3L1Q86VI1 746 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC50Q8IVM0 306 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC105Q8IYK2 499 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 LRRC34Q8IZ02 419 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 RTKN2Q8IZC4 609 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 MCOLN2Q8IZK6 566 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 FUKQ8N0W3 1084 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 PPM1KQ8N3J5 372 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 TRIM11Q96F44 468 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 DDX27Q96GQ7 796 aaKnown RBP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 BTBD6Q96KE9 485 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC114Q96M63 670 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 PDCD2LQ9BRP1 358 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 TMEM39BQ9GZU3 492 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 KIAA1683Q9H0B3 1180 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 KIAA1586Q9HCI6 787 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 HOMER3Q9NSC5 361 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 INTS9Q9NV88 658 aaKnown RBP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 PKD2L1Q9P0L9 805 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.98
CSTF3-208ENST00000528865 STYXL1Q9Y6J8 313 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 BRWD3Q6RI45 1802 aa8.96□□□□□ -0.98
CSTF3-208ENST00000528865 TLDC2A0PJX2 215 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 DENND3A2RUS2 1198 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 H0YCG3 227 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ATMINO43313 823 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 PROSCO94903 275 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 APBA3O96018 575 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 OAS1P00973 400 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 C4BPAP04003 597 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 SCP2P22307 547 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 HSPA1LP34931 641 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 KCNJ1P48048 391 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 RPS6P62753 249 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 CALCOCO2Q13137 446 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 DMP1Q13316 513 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 PSMD6Q15008 389 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ZYXQ15942 572 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 KCTD19Q17RG1 926 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 SPRED3Q2MJR0 410 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 BRDTQ58F21 947 aaPredicted RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 UBAP2Q5T6F2 1119 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 FAM102BQ5T8I3 360 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 MSL1Q68DK7 614 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 PPP1R2P3Q6NXS1 205 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ANO5Q75V66 913 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 TAOK1Q7L7X3 1001 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 VSIG10LQ86VR7 867 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 GPD1LQ8N335 351 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 LARGE2Q8N3Y3 721 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 OGFOD1Q8N543 542 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 BBOF1Q8ND07 529 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ATL2Q8NHH9 583 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 EPS8L3Q8TE67 593 aaKnown RBP8.95□□□□□ -0.98
CSTF3-208ENST00000528865 GRK7Q8WTQ7 553 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 GPRASP2Q96D09 838 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 SAAL1Q96ER3 474 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 SNF8Q96H20 258 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
CSTF3-208ENST00000528865 POP1Q99575 1024 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms