RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 TDHQ8IZJ6 230 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TTC39CQ8N584 583 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 RNF169Q8NCN4 708 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ANP32BQ92688 251 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 IQCDQ96DY2 449 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 FAXDC2Q96IV6 333 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF560Q96MR9 790 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM175Q9BSA9 504 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 DNAJC25Q9H1X3 360 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 TMX1Q9H3N1 280 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 SEMA6BQ9H3T3 888 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 CNTN3Q9P232 1028 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 NFE2L3Q9Y4A8 694 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 PCDHB12Q9Y5F1 795 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
SSBP3-211ENST00000528787 PDE4DIPQ5VU43 2346 aa8.6□□□□□ -1.03
SSBP3-211ENST00000528787 COL4A6Q14031 1691 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TTC26A0AVF1 554 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ARL5CA6NH57 179 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ABLIM1O14639 778 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 CLIC2O15247 247 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PMM2O15305 246 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 CBFA2T2O43439 604 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TLL1O43897 1013 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 CAPN15O75808 1086 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 DGKIO75912 1065 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 RECQL4O94761 1208 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 KIF4AO95239 1232 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 GJB5O95377 273 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 LAG3P18627 525 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ITGB8P26012 769 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 MTIF2P46199 727 aaKnown RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ALDH7A1P49419 539 aaKnown RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ACOT2P49753 483 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 KRT17Q04695 432 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 CYP24A1Q07973 514 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 KCNA1Q09470 495 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 BFSP1Q12934 665 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TUSC3Q13454 348 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TRPC3Q13507 836 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 BTG3Q14201 252 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TMEM132DQ14C87 1099 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 UBXN11Q5T124 520 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 FKBP15Q5T1M5 1219 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PDXDC1Q6P996 788 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 FIBCD1Q8N539 461 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 TAF4BQ92750 862 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 SNX27Q96L92 541 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 GDF15Q99988 308 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.59□□□□□ -1.035e-7■□□□□ 10.6
SSBP3-211ENST00000528787 CBWD1Q9BRT8 395 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 COLEC11Q9BWP8 271 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 APOL6Q9BWW8 343 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 OXCT2Q9BYC2 517 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PCIF1Q9H4Z3 704 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 SNTG2Q9NY99 539 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 ITGA11Q9UKX5 1188 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 SSX2IPQ9Y2D8 614 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PCDHA11Q9Y5I1 949 aa8.59□□□□□ -1.03
SSBP3-211ENST00000528787 PDCD11Q14690 1871 aaKnown RBP8.59□□□□□ -1.03
SSBP3-211ENST00000528787 FNDC1Q4ZHG4 1894 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 TMEM265A0A087WTH1 108 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 FSD2A1L4K1 749 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 GTPBP10A4D1E9 387 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 KCNJ18B7U540 433 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 H0YGN5 161 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ZC3H11AO75152 810 aaKnown RBP eCLIP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 PHACTR2O75167 634 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ALDH2P05091 517 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CXCL8P10145 99 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ACRP10323 421 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CD44P16070 742 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 BMP6P22004 513 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 RFX1P22670 979 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ADSSP30520 456 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 ATICP31939 592 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 HOXD13P35453 343 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 STX17P56962 302 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 OSTNP61366 133 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CLDN10P78369 228 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 RBP5P82980 135 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 CREMQ03060 361 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 KCNJ12Q14500 433 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 GPNMBQ14956 572 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 MAN2A1Q16706 1144 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 UVSSAQ2YD98 709 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 XKR4Q5GH76 650 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 WDR44Q5JSH3 913 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 SPOUT1Q5T280 376 aaKnown RBP8.58□□□□□ -1.04
SSBP3-211ENST00000528787 RASIP1Q5U651 963 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 TCERG1LQ5VWI1 586 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 EEF1DP3Q658K8 133 aa8.58□□□□□ -1.04
SSBP3-211ENST00000528787 KRT39Q6A163 491 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms