RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 FOSP01100 380 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 SELENOPP49908 381 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 RRADP55042 308 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 IL13RA1P78552 427 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 GPSM2P81274 684 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 CD69Q07108 199 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 PPP3CAQ08209 521 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 MGAT5Q09328 741 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 KLF10Q13118 480 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 R3HDM1Q15032 1099 aaKnown RBP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 CNN3Q15417 329 aaKnown RBP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 WDR72Q3MJ13 1102 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 KANK2Q63ZY3 851 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 SLFN13Q68D06 897 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 GRAMD4Q6IC98 578 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 C1orf228Q6PIY5 440 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 SKAP1Q86WV1 359 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 RHOT1Q8IXI2 618 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 KRT78Q8N1N4 520 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 ENAHQ8N8S7 591 aaPredicted RBP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 PPP1R14CQ8TAE6 165 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 KLHDC4Q8TBB5 520 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 ATXN2LQ8WWM7 1075 aaKnown RBP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 DYDC2Q96IM9 177 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 CDK5RAP3Q96JB5 506 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 CCDC138Q96M89 665 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 LMF1Q96S06 567 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 WRNIP1Q96S55 665 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 TBCBQ99426 244 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 SOX7Q9BT81 388 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 B3GNT5Q9BYG0 378 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 ZNF341Q9BYN7 854 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 OSBPL6Q9BZF3 934 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 UBA5Q9GZZ9 404 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 PLCB1Q9NQ66 1216 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 DMRT3Q9NQL9 472 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.03□□□□□ -1.76
BRCA2-203ENST00000528762 POLHQ9Y253 713 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 STXBP5LQ9Y2K9 1186 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 PCDHGB6Q9Y5F9 930 aa4.03□□□□□ -1.76
BRCA2-203ENST00000528762 CFAP69A5D8W1 941 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 MGEA5O60502 916 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 PHF2O75151 1096 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 SEC24DO94855 1032 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 FTLP02792 175 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 SETSIPP0DME0 302 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 ZKSCAN1P17029 563 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 TYRP1P17643 537 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 CTSSP25774 331 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 ADSLP30566 484 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 CSF2RBP32927 897 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 IL12RB1P42701 662 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 TRAPPC10P48553 1259 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 MAP2K6P52564 334 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 MGAT2Q10469 447 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 CHAF1AQ13111 956 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 IFIT5Q13325 482 aaKnown RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 LONRF1Q17RB8 773 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 C19orf54Q5BKX5 351 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 GJC2Q5T442 439 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 TCTN3Q6NUS6 607 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 MAEAQ7L5Y9 396 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 IFNL2Q8IZJ0 200 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 C3orf20Q8ND61 904 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 GIMAP8Q8ND71 665 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 OR2I1PQ8NGU4 316 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 KAT5Q92993 513 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 CLPTM1LQ96KA5 538 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 FDXACB1Q9BRP7 624 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.02□□□□□ -1.77
BRCA2-203ENST00000528762 PPCSQ9HAB8 311 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 KCND1Q9NSA2 647 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 TPCN1Q9ULQ1 816 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 DMTF1Q9Y222 760 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 NR2E3Q9Y5X4 410 aa4.02□□□□□ -1.77
BRCA2-203ENST00000528762 A0A0G2JNJ9 132 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 A0A1W2PR48 441 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 LY86O95711 162 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 CHGBP05060 677 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 LTA4HP09960 611 aaKnown RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 MYF5P13349 255 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 PEX2P28328 305 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 HK3P52790 923 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 PER3P56645 1201 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 MEF2AQ02078 507 aaPredicted RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 FGL2Q14314 439 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 SEPT2Q15019 361 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 UBE3CQ15386 1083 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 KHDC1Q4VXA5 237 aaKnown RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 HSP90AB4PQ58FF6 505 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 IGFL4Q6B9Z1 124 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 ABHD15Q6UXT9 468 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 OTOP2Q7RTS6 562 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 TAS1R1Q7RTX1 841 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 DPP9Q86TI2 863 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 TAX1BP1Q86VP1 789 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 COL23A1Q86Y22 540 aaPredicted RBP4.01□□□□□ -1.77
BRCA2-203ENST00000528762 OR5AN1Q8NGI8 311 aa4.01□□□□□ -1.77
BRCA2-203ENST00000528762 LRTOMTQ8WZ04 291 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms