RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GPR62Q9BZJ7 368 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 CD320Q9NPF0 282 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 IRAK3Q9Y616 596 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 SF3B1O75533 1304 aaKnown RBP eCLIP15.64■□□□□ 0.09
CAPN1-216ENST00000528739 VCANP13611 3396 aa15.64■□□□□ 0.09
CAPN1-216ENST00000528739 ZMYM2Q9UBW7 1377 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 HNRNPDLO14979 420 aaKnown RBP15.63■□□□□ 0.09
CAPN1-216ENST00000528739 B3GAT3O94766 335 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 ADH1AP07327 375 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 IDEP14735 1019 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 SP100P23497 879 aaPredicted RBP15.63■□□□□ 0.09
CAPN1-216ENST00000528739 NMT1P30419 496 aaKnown RBP15.63■□□□□ 0.09
CAPN1-216ENST00000528739 ZP2Q05996 745 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 ZPBP2Q6X784 338 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 DDX12PQ92771 950 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 FAM212AQ96EL1 285 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 PTPRHQ9HD43 1115 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 TSHZ2Q9NRE2 1034 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 DZANK1Q9NVP4 752 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 TBX20Q9UMR3 447 aa15.63■□□□□ 0.09
CAPN1-216ENST00000528739 SMIM28A0A1B0GU29 152 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 PPP6R2O75170 966 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 KIF4AO95239 1232 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 WEE2P0C1S8 567 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 KCNC3Q14003 757 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 CBX2Q14781 532 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-216ENST00000528739 SYCE2Q6PIF2 218 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 ELMSAN1Q6PJG2 1045 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 PALB2Q86YC2 1186 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 FBXL18Q96ME1 805 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 PHF7Q9BWX1 381 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-216ENST00000528739 EPHX3Q9H6B9 360 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 MRPL44Q9H9J2 332 aaKnown RBP15.62■□□□□ 0.09
CAPN1-216ENST00000528739 GOLGA2P5Q9HBQ8 144 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 SLC38A7Q9NVC3 462 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 TBC1D7Q9P0N9 293 aa15.62■□□□□ 0.09
CAPN1-216ENST00000528739 ATG2AQ2TAZ0 1938 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 TEX28O15482 410 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 YEATS4O95619 227 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 SPATA31D3P0C874 917 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 PROZP22891 400 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ABCD1P33897 745 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ME1P48163 572 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 CLCNKBP51801 687 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 DSG1Q02413 1049 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ITIH3Q06033 890 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 PKP1Q13835 747 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ZC2HC1CQ53FD0 456 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ATAT1Q5SQI0 421 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 KIAA0319Q5VV43 1072 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 KANK3Q6NY19 840 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 DCLRE1AQ6PJP8 1040 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 TMC5Q6UXY8 1006 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 SPATA31D4Q6ZUB0 917 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 SFR1Q86XK3 245 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 SLC22A17Q8WUG5 538 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 STAMQ92783 540 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 DHX58Q96C10 678 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 RIPOR3Q96MK2 946 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 UROC1Q96N76 676 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 TTPALQ9BTX7 342 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 S1PR5Q9H228 398 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 ADAM7Q9H2U9 754 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.61■□□□□ 0.09
CAPN1-216ENST00000528739 CFAP45Q9UL16 551 aa15.61■□□□□ 0.09
CAPN1-216ENST00000528739 MYMKA6NI61 221 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 TRAPPC3O43617 180 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 CUTAO60888 179 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 LILRB3O75022 631 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 GLUD1P00367 558 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 RPL17P18621 184 aaKnown RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 SCP2P22307 547 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 CLCN4P51793 760 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 ZNF131P52739 623 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 CREMQ03060 361 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 SPAG1Q07617 926 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 MCL1Q07820 350 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 ELAVL2Q12926 359 aaKnown RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 PRSS55Q6UWB4 352 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 KCNG4Q8TDN1 519 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 KHSRPQ92945 711 aaKnown RBP eCLIP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 SNX27Q96L92 541 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 PPP1R10Q96QC0 940 aaKnown RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 MSTO1Q9BUK6 570 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 C1QTNF1Q9BXJ1 281 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 RPF1Q9H9Y2 349 aaKnown RBP15.6■□□□□ 0.09
CAPN1-216ENST00000528739 MAN1C1Q9NR34 630 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 FAM13BQ9NYF5 915 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 CDH22Q9UJ99 828 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 NUB1Q9Y5A7 615 aa15.6■□□□□ 0.09
CAPN1-216ENST00000528739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.59■□□□□ 0.09
CAPN1-216ENST00000528739 PODXLO00592 558 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 GCNT3O95395 438 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 BRD1O95696 1058 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 CLTAP09496 248 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 CXCL8P10145 99 aa15.59■□□□□ 0.09
CAPN1-216ENST00000528739 ALADP13716 330 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms