RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 AXDND1Q5T1B0 1012 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-211ENST00000528484 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-211ENST00000528484 CDR2LQ86X02 465 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-211ENST00000528484 DCLK2Q8N568 766 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 ST13P5Q8NFI4 369 aaPredicted RBP12.78□□□□□ -0.36
CMTM1-211ENST00000528484 SLC7A14Q8TBB6 771 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 ZSCAN32Q9NX65 697 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 CDV3Q9UKY7 258 aaKnown RBP12.78□□□□□ -0.36
CMTM1-211ENST00000528484 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 KCNH3Q9ULD8 1083 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 STK36Q9NRP7 1315 aa12.78□□□□□ -0.36
CMTM1-211ENST00000528484 NCOR2Q9Y618 2525 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 POTEMA6NI47 508 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 ZBTB39O15060 712 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 B4GALT5O43286 388 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 EPB41L2O43491 1005 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 USO1O60763 962 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 KIF4AO95239 1232 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 GLRA2P23416 452 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 KRT2P35908 639 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 NTHL1P78549 312 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 LMNB2Q03252 620 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 MAPK6Q16659 721 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 ZNF852Q6ZMS4 543 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 GSTCDQ8NEC7 633 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 LNX1Q8TBB1 728 aaPredicted RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 KXD1Q9BQD3 176 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 CLSTN3Q9BQT9 956 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 DDX23Q9BUQ8 820 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.37
CMTM1-211ENST00000528484 SMG5Q9UPR3 1016 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 MRPS23Q9Y3D9 190 aaKnown RBP12.77□□□□□ -0.37
CMTM1-211ENST00000528484 CACNA1BQ00975 2339 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 TBC1D4O60343 1298 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 NEMFO60524 1076 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 LRRN2O75325 713 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
CMTM1-211ENST00000528484 ELF1P32519 619 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 OR1D2P34982 312 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 RARRES1P49788 294 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 NRLP54845 237 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 SPIRE1Q08AE8 756 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 PRPF4BQ13523 1007 aaKnown RBP12.76□□□□□ -0.37
CMTM1-211ENST00000528484 TPRG1Q6ZUI0 275 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 MAEAQ7L5Y9 396 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 ITFG1Q8TB96 612 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 PIGOQ8TEQ8 1089 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
CMTM1-211ENST00000528484 FAM126AQ9BYI3 521 aaPredicted RBP12.76□□□□□ -0.37
CMTM1-211ENST00000528484 TM6SF1Q9BZW5 370 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
CMTM1-211ENST00000528484 SNTG2Q9NY99 539 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 GDE1Q9NZC3 331 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
CMTM1-211ENST00000528484 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 ECI2O75521 394 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 RECQL4O94761 1208 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 B3GAT3O94766 335 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 LRG1P02750 347 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 ATP2B1P20020 1258 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 RPS9P46781 194 aaKnown RBP12.75□□□□□ -0.37
CMTM1-211ENST00000528484 RAB33AQ14088 237 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 TRIM29Q14134 588 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 NPAS3Q8IXF0 933 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 MAML2Q8IZL2 1156 aaPredicted RBP12.75□□□□□ -0.37
CMTM1-211ENST00000528484 UROC1Q96N76 676 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 HSD17B14Q9BPX1 270 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 PAAF1Q9BRP4 392 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 EPC1Q9H2F5 836 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
CMTM1-211ENST00000528484 DOCK6Q96HP0 2047 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 PRKCBP05771 671 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 LIG1P18858 919 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 CD72P21854 359 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 TXKP42681 527 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 SCRN1Q12765 414 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 PPP2R5AQ15172 486 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 CDCA2Q69YH5 1023 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ZBTB44Q8NCP5 570 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ERMNQ8TAM6 284 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 DEPTORQ8TB45 409 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
CMTM1-211ENST00000528484 ING5Q8WYH8 240 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms